Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0251 ATGCCTGGCAGTTTAGAAGCGCTGGATTTGGGCGTTCACATACCCTACCACTTCAGGTGCCCAATCTCCCTCGAGCTCATGCGCGACCCCGTCACCGTCTGCACCGGTCAGACCTACGACCGCCCCAGCATAGAGTCCTGGGTCGCCACCGGCAACACCACCTGCCCGGTCACCAGAGCCACTCTCACCGACTTCACCCTAATCCCCAACCACACGCTCCGCCGCCTAATCCAAGACTGGTGCGTCGCCAACCGCGCTTTTGGCGTCGAGCGCATTCCCACTCCCAAACAGCCTGCAGACCCTTCCCTCCTCCGCTCCCTCCTCAACCAAGCCTCCTCCGATTCCGCCCCAACCCAAATCCGCCTCTCCTCCCTGCGCCGACTCAGAGGACTCGCTCGTGACTCCGACAAGAATCGTTCCCTCATTGCCTCCCTCAACGCCACCCACATCCTATTAACGATCGTTTTCGGCGCCTCCTCCGACGAGTTGAGCCACGACTCCCTCGCTTTACTCGTCATGTTCTCGCTCACCGAGATCGATTGCGAGTCTATTGCTTCCGATTCGGAGAAGATCCAATACCTATCGCGCCTATTGTTCCACAATTCGTTCGAGGTCCGAGTTAACTCGGCCGCGTTGATTGAAATCGTCGCCGCAGGGACTCACTCGCCGGATCTCCGATCTCAGATCAGCAATGTCGACGAAATCTACGAAGGCGTGGTTGAGATTTTGAGGAACCCGATCTCGTACCCGCGCGCGCTCAAGGTAGGGATCAAGGCTCTGTTCGCGCTGTGTTTGGTGAAGCAGACGCGTCACAAGGCGGTGGCGGCGGGAGCGCCGGCGGTGCTAGTGGACCGCCTCGCCGATTTCGAGAAGTGCGACGCGGAGAGGGCGTTGGCGACGGTGGAGCTCCTTTGCCGCATTCCGGCGGGGTGCGCGGCGTTCGCGGGCCACGCGCTGACGGTGGCGCTGCTGGTGAAGATAATACTGAAGATCTCGGATCGGGCGACGGAGTACGCGGCGGGGGCGCTGCTTGCGCTGTGCTCCGAGTCGGAGAGGTGCCAGAGGGAGGCGGTGGCGGCGGGGGTGCTGACTCAGCTGCTGCTGCTTGTTCAGAGCGATTGCACGGAGAGGGCGAAGAGGAAGGCGCAGCTGTTGCTCAAGCTGCTTCGGGATTCGTGGCCTCAAGATTCCATCGGAAATTCTGACGATTTTGCATGCAGCCAGCTCGTGGTGGTGCCCTTTTGA 1245 0.6096 MPGSLEALDLGVHIPYHFRCPISLELMRDPVTVCTGQTYDRPSIESWVATGNTTCPVTRATLTDFTLIPNHTLRRLIQDWCVANRAFGVERIPTPKQPADPSLLRSLLNQASSDSAPTQIRLSSLRRLRGLARDSDKNRSLIASLNATHILLTIVFGASSDELSHDSLALLVMFSLTEIDCESIASDSEKIQYLSRLLFHNSFEVRVNSAALIEIVAAGTHSPDLRSQISNVDEIYEGVVEILRNPISYPRALKVGIKALFALCLVKQTRHKAVAAGAPAVLVDRLADFEKCDAERALATVELLCRIPAGCAAFAGHALTVALLVKIILKISDRATEYAAGALLALCSESERCQREAVAAGVLTQLLLLVQSDCTERAKRKAQLLLKLLRDSWPQDSIGNSDDFACSQLVVVPF* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0251 414 SUPERFAMILY ARM repeat 103 389 IPR016024 -
Aev03g0251 414 Pfam U-box domain 14 85 IPR003613 GO:0004842|GO:0016567
Aev03g0251 414 PANTHER WDSAM1 PROTEIN 4 410 IPR045185 GO:0061630
Aev03g0251 414 CDD RING-Ubox_PUB 18 59 IPR045210 -
Aev03g0251 414 Gene3D - 93 403 IPR011989 -
Aev03g0251 414 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 13 87 IPR013083 -
Aev03g0251 414 SUPERFAMILY RING/U-box 12 90 - -
Aev03g0251 414 SMART Ubox_2 17 80 IPR003613 GO:0004842|GO:0016567
Aev03g0251 414 ProSiteProfiles U-box domain profile. 13 87 IPR003613 GO:0004842|GO:0016567
Aev03g0251 414 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 4 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0251 Aev-Chr3 1938622 1939866 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0251 1 414 U-box Gene Family AT1G49780 67.139 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0251 - - gmx:100778730 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0251 03 1938622 1939866 Aev03g0251 03 1938622 1939866 ECH