Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0248 ATGGCTACCCCAAGTAAATCAATCCCAATAATGTCTTCAGACTCCTTGGAACAGAAGGGGAAAAGTATGACTGAATTAAATGCAAACGTGCTTCAATCTCCTTCAAATCAGCAACTCCGCAGCTCCTTAGATGGCCCAGTAGCTATCCTTTGGGATATTGAAAATTGTCCTGTTCCAAGTGATGTCCGCCCTGAAGATGTTGCTGGAAATATAAGAATGGCCTTGCGGGTACACCCAGTAATTCAAGGAGCTGTTATGATGTTTTCTGCTTATGGGGATTTCAATGCTTTCCCTAGGCGACTTAGAGAGGGCTGTCAGAGAACTGGTGTTAAACTCATTGATGTTCCCAATGGAAGAAAAGATGCTGCCGACAAAGCTATATTGGTTGACATGTTCTTATTTGCTCTTGACAACCCTCCACCGTCCTCTATCATGCTAATATCTGGAGACGTTGATTTTTCTCCTGCGCTTCACATTCTCGGTCAGCGGGGATATACTGTAGTTCTTGTCATCCCTGCTGGAGTAGGTGTATCATCTGCCCTATACAATGCTGGGAAATTTGTCTGGGACTGGCCTAGTGTGGCCCGTGGAGAAGGATTTGTTCCCCCTGCAAAGGCTTTGATGCCATCTCGCGGAGGTTCAATTGAGCTCGCCGGTTATCTGATGGGGTGCCATATCAATGACAACTCTGATGGACAAAATGAAGAAGCAATAGTTTATAGAGGGATGTCACAGAGCTATTATAACTCAAGGGATTTCTCAATGGTGTCACAATCTCTTTCTGAATACAACTGTGGTGCATCGAACATGACTTGCTTGCCAACAACTGTGAGATCACATAGCCTTCCTTCTGGATTGAATGATGTTCCGGGAGGACCTATGCCTTCTAGTGACCATAATGAATGCCAATTTTGGGGACCTACATCTGGGGATCTAAATAGTCTCAAGGACCAGCTGGTAAGGTTACTTGAACTTTCTGGAGGATGCCTGCCTTTGGCCCGAGTTCCAGCCGAGTACCAGAAACTTCATGGGAGAACTCTTTACATATCCGACTATGGGGCGGTGAAGTTGGTCAATCTTTTCAAGAAGATGGGTGATACAATAGCAGTTGAAGGGAAAGGGCAACGTAAATTTGTCTATCTCAGAAACTGGAAGGCAGGACCAAGTGCACCCCCGTTAGCTCTAGCAAAGAAAGATAAGAAAGGAAAGGGGGTCCAGGAAGATAATTCTAATACTGTCAATGGTGGCTGTTCTTCAGATGAGTTCTCAGATGATGAAAGAGTAGCCATAGAAGAACATGATGAGAGAAGTCACATAAGGGGTATTCAGGGAAGAGCAGCCAGATGTGAAGTTGATGACCATACTCTCGAGCAGTTCAAGCACGAGCTTCAAGAGATTCTAGTCAGCTACTCTTGTCGAATATTCCTAGGTTGTTTTGAGGCTATATACCAGCAAAGGTACAAGAAACAACTGGAGTATCAGAGATTTGGGGTGGACAAGTTGGAGGATTTGCTTGAGATAGTGAGTGATGTGGTAGAATTGCATGAGGAACCACAAAGCAAGAGGAAGTTCCTGGCTGCTTTGGGATGTTAG 1593 0.4488 MATPSKSIPIMSSDSLEQKGKSMTELNANVLQSPSNQQLRSSLDGPVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIQGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFSPALHILGQRGYTVVLVIPAGVGVSSALYNAGKFVWDWPSVARGEGFVPPAKALMPSRGGSIELAGYLMGCHINDNSDGQNEEAIVYRGMSQSYYNSRDFSMVSQSLSEYNCGASNMTCLPTTVRSHSLPSGLNDVPGGPMPSSDHNECQFWGPTSGDLNSLKDQLVRLLELSGGCLPLARVPAEYQKLHGRTLYISDYGAVKLVNLFKKMGDTIAVEGKGQRKFVYLRNWKAGPSAPPLALAKKDKKGKGVQEDNSNTVNGGCSSDEFSDDERVAIEEHDERSHIRGIQGRAARCEVDDHTLEQFKHELQEILVSYSCRIFLGCFEAIYQQRYKKQLEYQRFGVDKLEDLLEIVSDVVELHEEPQSKRKFLAALGC* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0248 530 Gene3D - 311 380 IPR041966 -
Aev03g0248 530 Gene3D - 451 523 IPR041966 -
Aev03g0248 530 MobiDBLite consensus disorder prediction 395 418 - -
Aev03g0248 530 CDD LOTUS 312 381 - -
Aev03g0248 530 Pfam OST-HTH/LOTUS domain 456 520 IPR025605 -
Aev03g0248 530 Pfam OST-HTH/LOTUS domain 312 378 IPR025605 -
Aev03g0248 530 Gene3D - 42 192 - -
Aev03g0248 530 ProSiteProfiles OST-type HTH domain profile. 455 529 IPR025605 -
Aev03g0248 530 CDD LOTUS 456 519 - -
Aev03g0248 530 ProSiteProfiles OST-type HTH domain profile. 311 383 IPR025605 -
Aev03g0248 530 PANTHER LIMKAIN B LKAP 11 525 IPR024768 GO:0005777|GO:0010468|GO:1903231
Aev03g0248 530 PANTHER - 11 525 - -
Aev03g0248 530 CDD PIN_limkain_b1_N_like 46 172 - -
Aev03g0248 530 Pfam NYN domain 46 184 IPR021139 GO:0004540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0248 Aev-Chr3 1908977 1910569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0248 43 197 C2H2 Transcription Factor Family AT5G61190 42.581 2.22e-28 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0248 - - gmx:100818186 895.19