Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0237 ATGTCTTCCCACAACAACCGCCTCACCGCCGAGCAAGAACTCTCCGTCATCGTCGCCACCCTCACCAACGTCGTCGTCGGCTCCACCTCTCTCTCCCCTTCCCCTCCTCCTGCTGACTTCCTCCACCTCGCCTCCTCTCAACCTTATTCCGCTGCCGCCGCCACACCCAGCTCCTGCTTCGAGAGGCTAGTCCCTTCCGCCGCCGGCATGGACACGTGTCGCGAATGCAACATTGCGGGGTGCTTGGGATGCAACTTCTTCAGGGAAGAGAGCAAGAGCAGCACCAGCAGCAGCAGCGACAACAAGAAGAAGCAGCAGCAGCAGCAGCAGAAGAGGGCGAAGAAGAAATACAGGGGAGTGAGGCAGAGGCCGTGGGGGAAATGGGCCGCCGAGATCCGCGACCCCAGAAGGGCGGCCCGCGTGTGGCTGGGCACCTTCAACACGGCGGAGGAGGCCGCCATGGCTTACGACAAGGCCGCCATGGAGTTCCGTGGGCCCCGCGCCAAGCTCAATTTCCCGATGGTGGACGAGTCCCTGAGGCAGCCACCACCAGAAGAACAAGAGCAAGAAGAAGAAGAAGAAGAATTACAAGGACAGCAGCAGATGGTAAAGGAAGAGAACTCCAAGGACGGAATGGAAATGGAAACGACGGCGCCGTTTGGGAACAGAGAAAGTGAGTTCTGGGACAGGATTGGGGACGCTGATTTTCACCAGCTTATGATGATGATGGATTTTGCTGGAAATTCCTCTGACTCTGCTGCCACACCCAACACTCTCAGTTCCTCATGA 789 0.583 MSSHNNRLTAEQELSVIVATLTNVVVGSTSLSPSPPPADFLHLASSQPYSAAAATPSSCFERLVPSAAGMDTCRECNIAGCLGCNFFREESKSSTSSSSDNKKKQQQQQQKRAKKKYRGVRQRPWGKWAAEIRDPRRAARVWLGTFNTAEEAAMAYDKAAMEFRGPRAKLNFPMVDESLRQPPPEEQEQEEEEEELQGQQQMVKEENSKDGMEMETTAPFGNRESEFWDRIGDADFHQLMMMMDFAGNSSDSAATPNTLSSS* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0237 262 PRINTS Ethylene responsive element binding protein signature 117 128 IPR001471 GO:0003700|GO:0006355
Aev03g0237 262 PRINTS Ethylene responsive element binding protein signature 139 155 IPR001471 GO:0003700|GO:0006355
Aev03g0237 262 ProSiteProfiles AP2/ERF domain profile. 116 173 IPR001471 GO:0003700|GO:0006355
Aev03g0237 262 Coils Coil 103 123 - -
Aev03g0237 262 MobiDBLite consensus disorder prediction 92 121 - -
Aev03g0237 262 Gene3D AP2/ERF domain 115 175 IPR036955 GO:0003700|GO:0006355
Aev03g0237 262 CDD AP2 117 173 IPR001471 GO:0003700|GO:0006355
Aev03g0237 262 SMART rav1_2 116 179 IPR001471 GO:0003700|GO:0006355
Aev03g0237 262 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF109 3 253 - -
Aev03g0237 262 MobiDBLite consensus disorder prediction 177 227 - -
Aev03g0237 262 Pfam AP2 domain 116 165 IPR001471 GO:0003700|GO:0006355
Aev03g0237 262 Coils Coil 186 209 - -
Aev03g0237 262 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 3 253 - -
Aev03g0237 262 SUPERFAMILY DNA-binding domain 116 174 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0237 Aev-Chr3 1817754 1818542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0237 7 176 AP2-EREBP Transcription Factor Family AT4G34410 44.737 8.75e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aev03g0237 AP2 7.7e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0237 - - adu:107469741 296.204