Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0209 ATGGGTTCGGTTCCAGCAGAACTGAGCTTAGATATAAGAGGAGCGTCTTCTCCCACCACCTTCGTTCCCAAGACCATAACTGATTTCCTCTGCGAGCTCTCAACCCTCCCTCCCTCCCCCGATAAGCTCTCCAGGCTCAATGAATTCCTCGCCCGCTTGGAAGACGAATTCTCCAAGATCCACGCCTTCAAGCGCGAGCTCCCTCTCTCCATGCTCCTCCTCAACGATGCGATTGCAGTTCTGAAGGAGGAATCGGAGAAATGCAGGGCACATAAATCTCAGCCAGTGCTGGAGGAGTTCATTCCGTTGAAGAAAGAGTTGGATCAGAGCGAAGAGGAAGAGGAACCTCTTCACCATCATCATCTTCACCGCAATAAGGACAACAAGGAATGCAGAGATAATAATAATAAGAAGTCCTGGTTGAGTTCCGTTCAGCTCTGGAACACTCCCACTATCAATAACAATGCATCTGATCATAAACAACAACACCATCATAAATTATTGGAAGCCAAAACCAAGAAGAACGAGGAACAACTGCAATCTGTGGGGGGTGAGGATCTTTTTCAATCTTGTAGAAATAGAGGAGGTGGTGGTGGTGGAAGGGGGTTTATGCCTTTCTCAACAGCTATGTACTCTTCTGTGCCGGTAACAACTGTGACACTGGCCGCTGCAGCAGCAACAAAAGAAGAGAAGGAAGACTCTGTTTTCAATAGTAGGCTCACTCTTCTGACACCTGCACCTGCAGTGAAAAGCTTGATGAGGGAAGGGTCTGGTTCCAGTGGATCCAGAAGCAGTTCCGACAGGGCTGTTTCCTCTTCCTCTCCACCAGCTGCACTGCCAAGTCTGCGCACTACAACCGCACCACCACTTCAGCCCCACCATCAGAGTGCTAGGAAACAGAGGAGGTGCTGGTCCCCTGAGTTGCACCGCCGATTCGTCAATGCCTTGCAGAAGCTCGGTGGCTCTCAAGTGGCAACACCAAAACAAATCAGAGAACTGATGCAGGTTGATGGCCTGACCAACGATGAAGTGAAGAGCCATTTACAAAAATACCGACTTCATACAAGAAGAGTTCCATCTGCAAGTGGTAATCAATCTGTTGTAGTTCTTGGAGGTTTGTGGATGTCACAAGGCCAACAAGATCAGTACAACGATTCCTCAAAAGGAAGCAGTTCAGGTTCTGGTTCTCCCCAAAGTCCCCTTCATTTAGGTGCAGGATCCCGGGGAGGAACATCCCCAACTGAGGAGGGTGATAGCATGGAAGATGATGAGGATGCAAAATCAGAGAGTTATAGCTGGAAAAGCCACTCTCACAAACAACCTGGAAAAGTTGATGTATAG 1341 0.4862 MGSVPAELSLDIRGASSPTTFVPKTITDFLCELSTLPPSPDKLSRLNEFLARLEDEFSKIHAFKRELPLSMLLLNDAIAVLKEESEKCRAHKSQPVLEEFIPLKKELDQSEEEEEPLHHHHLHRNKDNKECRDNNNKKSWLSSVQLWNTPTINNNASDHKQQHHHKLLEAKTKKNEEQLQSVGGEDLFQSCRNRGGGGGGRGFMPFSTAMYSSVPVTTVTLAAAAATKEEKEDSVFNSRLTLLTPAPAVKSLMREGSGSSGSRSSSDRAVSSSSPPAALPSLRTTTAPPLQPHHQSARKQRRCWSPELHRRFVNALQKLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRVPSASGNQSVVVLGGLWMSQGQQDQYNDSSKGSSSGSGSPQSPLHLGAGSRGGTSPTEEGDSMEDDEDAKSESYSWKSHSHKQPGKVDV* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0209 446 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 299 354 IPR006447 GO:0003677
Aev03g0209 446 Gene3D - 298 356 - -
Aev03g0209 446 MobiDBLite consensus disorder prediction 247 303 - -
Aev03g0209 446 MobiDBLite consensus disorder prediction 107 135 - -
Aev03g0209 446 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 16 439 IPR044787 GO:0003700|GO:0006355
Aev03g0209 446 MobiDBLite consensus disorder prediction 379 401 - -
Aev03g0209 446 Pfam Myb-like DNA-binding domain 301 352 IPR001005 -
Aev03g0209 446 MobiDBLite consensus disorder prediction 379 446 - -
Aev03g0209 446 MobiDBLite consensus disorder prediction 255 293 - -
Aev03g0209 446 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 296 356 IPR017930 -
Aev03g0209 446 PANTHER TRANSCRIPTION FACTOR HHO6 16 439 - -
Aev03g0209 446 MobiDBLite consensus disorder prediction 426 446 - -
Aev03g0209 446 SUPERFAMILY Homeodomain-like 297 357 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0209 Aev-Chr3 1638387 1640528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0209 45 375 G2-like Transcription Factor Family AT2G03500 36.416 1.46e-50 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev03g0209 Myb_DNA-binding 4.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0209 - - mtr:MTR_4g086835 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0209 03 1638387 1640528 Aev03g0209 03 1638387 1640528 ECH