LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev03g0177	ATGCGTCCAACATTATTGAGCATTCTATCGATATCACTGGTGTTAGTTTTATGTTGTTTTACTTCTTGTTCTTCCGCCGCTGTGAGGCGGTTCCTCCACCAGCCACTCTTCCCTAGAGTCCCCATTGTTCCACCAACACAACCACCATTGCTACCACCAGCATCCTCTCCACAACCACAGCCACAACCCCAGCATCAACAACCAAAGCTTCCATTTTCTTCAACAACCCCTTCTTCACCTTCTTCTTCTTCACCAAAGAATCCCTTTTTCTTCCCTTCCTACAGTCCTCCACCACCGCTCCCTCCATCGCCACCCATAGTCGCCACATTCCCGGCGAATATCTCCTCGCTCCTCCTCCCACACCCCTCTGCCCGCACCCACCGCCCTGCCCTTGCGCTCGCCCTATCACTCTCCCTCCTCTCCCTCACCCTCCTCGCCGCCGCCGCCGCTTTCGCCCTCCACCGCCGCCGCCGCTTTACCTCCTCTGCAGGCGGAGATGACGACGACAAGGCCTCTAGATCAGACGTCCTCCGTCTGTATCCCCGGAACGCCGCTACCTCCGATGGCGTCCACCCGAAGCCCCGCGGCGGTTCGTCGAGCCCAAGGTCCGAGTACTTGTACCTCGGAACGGTGGCGAGTTCGGAGCCCCCGGATTCGAGCTGCAGCAGCAGCACAAACAGCGGTATCAGGCCGCCGCCGTACCGGAAACTCAGTGACTCGCCGGAGCTGAAACCGCTGCCTCCACTTCCGCGCAATAATTTCAGACCATGGCTGAGCGAAGAAGAGGACAATGAAGAGAAGAAGAATGAGAATGAAGAAGAAGACGAAGAGTTTTTTTCTCCGAGAGGGTCTTCTGCAAACAAACAGCAGAGTCCTCCTTCCCCTGTTGCGCTCGCTGCAACGAGTTCTCGCTCGTTGAAGGCTTTTCATTTGGAGAAACTTGGGATCCAGAGCTTCACTTCGAGAACTCCTTCCTACCCTCGTTCGAACTCTCTTTCAAATTCTCATTCCAGTTCCCCTTTGAGCCCCACGAGCATCAAATCGTCACATCATCAGAACCACCCCATTTCTGCGTCGCAATCTCCGTCTTTCTCTTCGTTATCTTGTTCTCCGAAGCCGATTGAGGACTTGGGTTCGAATTGGGATGTTTCCGGTCAGGTGAAGGATTTTCCGACGACCAATCTGCCTCCTCCGCCACCCCCACCGCCGCCTCCGCCGCGGTTTTGGGAGGCTCCGGTTGTGAATAAGAGTCAGAGTGAGGAGACTCCGAAGCCAAAGTTGAAAGCTTTGCATTGGGATAAAGTTAAGGCCAGTTCCGATAGGGCCATGGTTTGGGATCGGTTGAGACCAAGTTCTTTCCAATTGAACGAGGACATGATTGAGACGCTGTTTATGGTGAATAATAATAATAATAATGGTAATAACAATAATAATTTTAAGGAGAATCCATCACTTGCTCTAAGAGATAATGGTCGGCGTCCAATGGTTCATTCTTCGCCAATGCCACCGGAAAACAGGGTGCTTGACCCTAAGAAGTCTCAGAACATTGCCATTTTGCTTAGGGCACTCAATGTAACTATTGATGAAGTTTGTGAAGCCCTCAGGGAAGGCAATTGTGATACATTGGGGACTGAACTTCTAGAAAGTTTACTGAAGATGGCACCAACCAAGGAGGAAGAGTTGAAGCTGAGGGAGTTCCAAGATGAAACGCCCTTCAAGCTTGGCCCAGCTGAGAAATTTCTTAAAGTCATGCTTGATATACCTTTTGCATTTAAGAGAGTGGATGCTTTGCTCTACATTGCTAATTTTGACTCTGAATTAGAATACCTTAAGAAGTCCTTTGAAACTCTTGAGGTGGCTTGCGGAGAATTGAAGAATAGCAGAATGTTTCTGAAGTTACTGGAGGCGGTGCTCAGAACCGGAAACAGGATGAATGTTGGCACCAATCGTGGCGATGCACATGCATTCAAACTCGACACACTCTTGAAGCTAGTTGACATCAAAGGAACCGACGGAAAGACCACTCTACTGCATTTTGTTGTACAGGAGATCGTCAGAACCGAGGGTTCTCATATTTCTGGTTCTAACCATCATCAAACCTGTGACAGCAACGAGCAGTATAGCATTCAAGATGAAGTGAACTTCAGGAAGCTTGGACTGCAAGTCGTTTCAGGCTTGAGTGGGGAGCTCACCAATGTAAAAAAAGCTGCTGCCATGGATTCAGACACGCTGAGTAGTGATGTCGCTAAACTCGCCAGAGGAATCGAGAAAGTTGCGGAAGTTATCGCATTAAACGAGAAGTCACCCTTGAAGGAAACCAGCCAAAAGTTTTCCGAGGCAATGAAAGGTTTCTTGGAGAAGGGAGGAGAAGAGATTTTAAGAATCCAGACCCAAGAGAAGAATGCTCTCTCCTCAGTTAAGGAGATAACTCAGTATTTCCATGGAAATTCAGCAAAAGAAGAAGCTCGTCCATTCAGAATCTTTATGGTTGTGAGGGATTTCCTTTCAATACTAGACGGTGTATGCAAGGAAGTTGGGAAAGCAAATGATAGGACTTTATTTGGTTCTCGCCAATCTGTAATGCCTGCAAACCCTATAATGCCACCATTTTTTCCTATGATGATTACTGGTAAGCAGCCATGTGATTCCTCAGAATCTGACTAA	2664	0.4895	MRPTLLSILSISLVLVLCCFTSCSSAAVRRFLHQPLFPRVPIVPPTQPPLLPPASSPQPQPQPQHQQPKLPFSSTTPSSPSSSSPKNPFFFPSYSPPPPLPPSPPIVATFPANISSLLLPHPSARTHRPALALALSLSLLSLTLLAAAAAFALHRRRRFTSSAGGDDDDKASRSDVLRLYPRNAATSDGVHPKPRGGSSSPRSEYLYLGTVASSEPPDSSCSSSTNSGIRPPPYRKLSDSPELKPLPPLPRNNFRPWLSEEEDNEEKKNENEEEDEEFFSPRGSSANKQQSPPSPVALAATSSRSLKAFHLEKLGIQSFTSRTPSYPRSNSLSNSHSSSPLSPTSIKSSHHQNHPISASQSPSFSSLSCSPKPIEDLGSNWDVSGQVKDFPTTNLPPPPPPPPPPPRFWEAPVVNKSQSEETPKPKLKALHWDKVKASSDRAMVWDRLRPSSFQLNEDMIETLFMVNNNNNNGNNNNNFKENPSLALRDNGRRPMVHSSPMPPENRVLDPKKSQNIAILLRALNVTIDEVCEALREGNCDTLGTELLESLLKMAPTKEEELKLREFQDETPFKLGPAEKFLKVMLDIPFAFKRVDALLYIANFDSELEYLKKSFETLEVACGELKNSRMFLKLLEAVLRTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIVRTEGSHISGSNHHQTCDSNEQYSIQDEVNFRKLGLQVVSGLSGELTNVKKAAAMDSDTLSSDVAKLARGIEKVAEVIALNEKSPLKETSQKFSEAMKGFLEKGGEEILRIQTQEKNALSSVKEITQYFHGNSAKEEARPFRIFMVVRDFLSILDGVCKEVGKANDRTLFGSRQSVMPANPIMPPFFPMMITGKQPCDSSESD*	888

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev03g0177	887	MobiDBLite	consensus disorder prediction	282	301	-	-
	Aev03g0177	887	MobiDBLite	consensus disorder prediction	317	409	-	-
	Aev03g0177	887	MobiDBLite	consensus disorder prediction	180	301	-	-
	Aev03g0177	887	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	396	848	-	-
	Aev03g0177	887	MobiDBLite	consensus disorder prediction	392	409	-	-
	Aev03g0177	887	PANTHER	FORMIN-RELATED	13	883	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015
	Aev03g0177	887	PANTHER	FORMIN-LIKE PROTEIN 2	13	883	-	-
	Aev03g0177	887	MobiDBLite	consensus disorder prediction	47	95	-	-
	Aev03g0177	887	Pfam	Formin Homology 2 Domain	418	838	IPR015425	-
	Aev03g0177	887	MobiDBLite	consensus disorder prediction	47	66	-	-
	Aev03g0177	887	MobiDBLite	consensus disorder prediction	203	231	-	-
	Aev03g0177	887	Gene3D	Formin, FH2 domain	424	860	IPR042201	-
	Aev03g0177	887	SMART	it6_source	417	853	IPR015425	-
	Aev03g0177	887	ProSiteProfiles	Formin homology-2 (FH2) domain profile.	417	864	IPR015425	-
	Aev03g0177	887	MobiDBLite	consensus disorder prediction	67	89	-	-
	Aev03g0177	887	MobiDBLite	consensus disorder prediction	317	373	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev03g0177	Aev-Chr3	1423507	1426806	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev03g0177	109	875	FH2 protein (formin) Gene Family	AT2G43800	46.305	0.0	590

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev03g0177	-		-	adu:107480832	1041.57