Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0175 ATGGTTTACTCCTTTTATAGCTCGAATCCATCGCCTCGCTCTGATATTTCAAGGTTGTTTACTAGTCCTACTTTGCATAATAACCAAGGAGATTCCACAAATTGTGCCTCTCTTTTGCCAAGTGGGCTGGCATCATCATCATCACATTCCTTGGTTTTTGAGAGTGAAAAGGGAGAGATAGTGAATGGATCATCATTAGAAGCTGCAAGGATAGGAAAGAATGAGGCCAAAGCTTTGGCTGCTATGAAGAGCCATAGTGAAGCTGAGAGGAGGAGGAGGGAAAGAATAAATGGTCATCTTGCAACTCTACGTGGTCTTGTTCCCTCCACTGACAAGATGGACAAAGCCACATTACTTGCTAAAGTAATTAGCCAAGTGAAGGAATTGAAGAATAATGCAATGGAAGCAAGTAAAGGTCTTCTAATCCCAACAGATTCTGATGAAGTTGAAGTTGAGCCACATAATGATGAAGAAGAAGATGGATCCATGTATTACAAAGCATCAATATGTTGTGATTTCATACCTGAGATACTTTCTGACATAAGACACACAATTGATGCACTTCAACTGCAATTGGTAAAAGCAGAAATGTCAACATTTGAAGGCAGAATGAAGAATGTGTACATCTATAAATGTTGCAAAGGGGGCAACAATGTCAACAATGAAGCATGCCAAGTTCTTGCAAGTAGTGTTCACAAGGCACTGAATGCTGTAATTGATAAGGCTAATGCCTCACTTGAGTACTCACTAAGAGCATCAGTTCCAACCAAGAGGAGAAGAATCTGTTTGGTTGAAACATCCACTTCCTCATGCAACCATGACTCTTGTTCTGGTTGA 837 0.4038 MVYSFYSSNPSPRSDISRLFTSPTLHNNQGDSTNCASLLPSGLASSSSHSLVFESEKGEIVNGSSLEAARIGKNEAKALAAMKSHSEAERRRRERINGHLATLRGLVPSTDKMDKATLLAKVISQVKELKNNAMEASKGLLIPTDSDEVEVEPHNDEEEDGSMYYKASICCDFIPEILSDIRHTIDALQLQLVKAEMSTFEGRMKNVYIYKCCKGGNNVNNEACQVLASSVHKALNAVIDKANASLEYSLRASVPTKRRRICLVETSTSSCNHDSCSG* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0175 278 PANTHER DNA BINDING PROTEIN-LIKE 41 271 - -
Aev03g0175 278 MobiDBLite consensus disorder prediction 1 25 - -
Aev03g0175 278 Gene3D - 75 138 IPR036638 GO:0046983
Aev03g0175 278 Pfam Helix-loop-helix DNA-binding domain 84 129 IPR011598 GO:0046983
Aev03g0175 278 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 80 129 IPR011598 GO:0046983
Aev03g0175 278 PANTHER TRANSCRIPTION FACTOR BHLH30 41 271 IPR045847 GO:0003700|GO:0006355
Aev03g0175 278 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 84 132 IPR036638 GO:0046983
Aev03g0175 278 SMART finulus 86 135 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0175 Aev-Chr3 1409581 1412325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0175 77 238 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 43.114 4.59e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev03g0175 HLH 3.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0175 - - gmx:100804756 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0175 03 1409581 1412325 Aev03g0175 03 1409581 1412325 ECH