Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0149 ATGAGTGGAGGAATCAGGCAACCAACGATGAACCATGCCATGACATATCTGAAGGTGGTGGAGATTACACTTCAATATGAGAAGGAAAAGTATCAAGAATTTCAGCAACTTCTCAACAGTTATTTCAATGATCGTCAGAGGCAAAGTACAGAGGAGGTGATAGAGAAGGTGAAAGAGCTGTTTGAAGACCATATTGGTCTGCTCTTTGGATTCAATGTGTTTTTGCCACATGGGTTTGAAATCAATCTTCCATTGGAGGGTGGTCAACCACAAAATCCTCCGAATCTCCATGATGCCGTGAATTTTCTGGGCATGATCAAGATGAGTCATTCTGCAGGTGGTAATATTGCTGTTTACTATTCCTTTCTGGACATACTGGCATTGTACAGAAGAGGAAGAAAGCCTATTGCTGAGGTGCATTGGGAGATTGTTATTCTTTTCTCGGACTACATTGATCTTATTAATGAGTTTGATAGGTTTCTCCCAACAACTGAGCCAGATCCAGTTATGCTTCTCGCTGAACTTACTAGGCATCAATGA 540 0.413 MSGGIRQPTMNHAMTYLKVVEITLQYEKEKYQEFQQLLNSYFNDRQRQSTEEVIEKVKELFEDHIGLLFGFNVFLPHGFEINLPLEGGQPQNPPNLHDAVNFLGMIKMSHSAGGNIAVYYSFLDILALYRRGRKPIAEVHWEIVILFSDYIDLINEFDRFLPTTEPDPVMLLAELTRHQ* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0149 179 Gene3D Paired amphipathic helix 6 78 IPR036600 GO:0006355
Aev03g0149 179 ProSiteProfiles PAH domain profile. 92 164 IPR003822 GO:0006355
Aev03g0149 179 ProSiteProfiles PAH domain profile. 6 78 IPR003822 GO:0006355
Aev03g0149 179 SUPERFAMILY PAH2 domain 7 77 IPR036600 GO:0006355
Aev03g0149 179 SUPERFAMILY PAH2 domain 88 163 IPR036600 GO:0006355
Aev03g0149 179 PANTHER SIN3B-RELATED 6 164 IPR039774 GO:0003714
Aev03g0149 179 Pfam Paired amphipathic helix repeat 118 161 IPR003822 GO:0006355
Aev03g0149 179 Pfam Paired amphipathic helix repeat 29 75 IPR003822 GO:0006355
Aev03g0149 179 Gene3D Paired amphipathic helix 88 164 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0149 Aev-Chr3 1264648 1265455 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0149 3 90 WRKY Transcription Factor Family AT4G12020 35.227 2.81e-07 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aev03g0149 PAH 9.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0149 - K11644 ccaj:109792823 139.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1357 05 9732131 9740594 Aev03g0149 03 1264648 1265455 PCT