Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0148 ATGAGTAGAGGAATCAGCCAACCAACGATGATAGATGCCTTCAAATATCTGGAGGCGGTGGAGATTACACTTGGAGATGACAAGGATAAGTTTAAACAATTTGTGGACGTTCTCAACCGTTTTTTCAATAATCGTCAAAGGCAAACTGCAGAGGAGGTGATAGCGAGAGCGAAAGAGCTGTTTAAGGACCATATTGGTCTGCTCTTTGGATTGAATGTATTCTTGCCATTTGGATTTCAAATCAAGCTTCCATTGGAGGATGCTCAACAACAATCTCCCCTCAATCCCCGTGTTACGACTGAACAAGCCAGGAATTTTCTTAACATGATCAGGATGACTCAGTTTGAAGATGGTAATGCTGTTTACCATTCTATTATCGACATACTGAAGTTGTACAAAAGAGGAACCAAGCCTGTCGCTGAGGCTTATTGGGAGATTGTTATGCTTTTCAAGGGCCACAATGAACTGATTAATGAGTTTAATAAATTTGTCCCAATAAATGCGTATGATCCAGTTATGCTTCTCGCTGATGTTATTTCGCGGGAGTGA 549 0.4098 MSRGISQPTMIDAFKYLEAVEITLGDDKDKFKQFVDVLNRFFNNRQRQTAEEVIARAKELFKDHIGLLFGLNVFLPFGFQIKLPLEDAQQQSPLNPRVTTEQARNFLNMIRMTQFEDGNAVYHSIIDILKLYKRGTKPVAEAYWEIVMLFKGHNELINEFNKFVPINAYDPVMLLADVISRE* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0148 182 ProSiteProfiles PAH domain profile. 7 78 IPR003822 GO:0006355
Aev03g0148 182 SUPERFAMILY PAH2 domain 93 165 IPR036600 GO:0006355
Aev03g0148 182 Gene3D Paired amphipathic helix 92 166 IPR036600 GO:0006355
Aev03g0148 182 PANTHER SIN3B-RELATED 7 165 IPR039774 GO:0003714
Aev03g0148 182 Gene3D Paired amphipathic helix 12 76 IPR036600 GO:0006355
Aev03g0148 182 SUPERFAMILY PAH2 domain 7 76 IPR036600 GO:0006355
Aev03g0148 182 Pfam Paired amphipathic helix repeat 29 75 IPR003822 GO:0006355
Aev03g0148 182 Pfam Paired amphipathic helix repeat 121 164 IPR003822 GO:0006355
Aev03g0148 182 ProSiteProfiles PAH domain profile. 96 167 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0148 Aev-Chr3 1261918 1262885 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0148 9 87 WRKY Transcription Factor Family AT4G12020 40.506 3.95e-08 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aev03g0148 PAH 4.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0148 - K11644 ath:AT1G10450 101.293