LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev03g0140	ATGGATTTGAGTAGCAATAGCAATGGCAATGGCAATGGCAACGAAGAGAGTGAACTGTACCATGCTCAAATCCACCTGTACAAGCATGTGTACAACTGGGTAACCTCCATGGCCCTAAAATCTGCCATGGAGCTGGGCATAGCAGACATAATCCACAACCATGGAAAACCCATCACTCTCACCGAATTAGCCTCTGCTCTCAAACTCCACCCTTCTAAAATCGGGAACCTCCACAGGTTCCTCCGCCTCCTAACACACAACGGCTTCTTCGCCAAAACAGGGGAAGACGCATATGCTCTGACTCCCCCATCCAAGCTTCTCATAAGAAGCAAGCCCACATGCCTGGCTTCAATAGTCCGGGGTGCACTCCATTCAAGCTCCCTGGACATGTGGCACTCTTCCAAGAAATGGTTCACCGAAGAAAAGGACGAGACCATGTTTGAGAGCGCAACAGGGGAGAGTTTCTGGGACTTCCTCAACAAGACGCCCGATGCTCTGAGCATGTTCCAGGAGGCCATGGCTGCCGATTCCTACATGTTCAAGCTCGCTCTCAGAGAGTGCCGCCACGTGTTCGAGGGCTTGGGTTCGCTTGTTGATGTTGGAGGCGGAACCGGTGGTGTCACCAAGCTCATCCATGAAGCTTTCCCTCACTTGAAGTGCACCGTTTTTGACCAGCCTCAGGTTGTGGCTAACTTGACAGGGGACGATAAATTGAACTTTGTTGGTGGCGATATGTTCAGCTCCATCCCTTCTGCCGATGCAGTTTTACTCAAGTGGGTTCTACATGACTGGAACGATGAGATGTCATTGAAGATATTGAAGAACTGCAAGGAAGCAATCTCGGGGAGAGGGAAAGAAGGGAAGGTGATTATCATAGACATAGCGATTGATGAAGCGAGTGATGAGCCCGGGTTGACTGAGTTGAAGCTGGACTATGATTTGGTGATGTTGACTATGTTCAATGGGAAGGAGAGGGAGAAGAAAGAATGGGAGAAACTCATATACGATGCAGGGTTCAGCAGATACACGATTACCCCTATTTGTGGCTTCAAATCTCTCATTCAAGTTTATCCTTGA	1077	0.4912	MDLSSNSNGNGNGNEESELYHAQIHLYKHVYNWVTSMALKSAMELGIADIIHNHGKPITLTELASALKLHPSKIGNLHRFLRLLTHNGFFAKTGEDAYALTPPSKLLIRSKPTCLASIVRGALHSSSLDMWHSSKKWFTEEKDETMFESATGESFWDFLNKTPDALSMFQEAMAADSYMFKLALRECRHVFEGLGSLVDVGGGTGGVTKLIHEAFPHLKCTVFDQPQVVANLTGDDKLNFVGGDMFSSIPSADAVLLKWVLHDWNDEMSLKILKNCKEAISGRGKEGKVIIIDIAIDEASDEPGLTELKLDYDLVMLTMFNGKEREKKEWEKLIYDAGFSRYTITPICGFKSLIQVYP*	359

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev03g0140	358	SUPERFAMILY	"Winged helix" DNA-binding domain	16	111	IPR036390	-
	Aev03g0140	358	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	117	355	IPR029063	-
	Aev03g0140	358	Pfam	O-methyltransferase domain	131	340	IPR001077	GO:0008171
	Aev03g0140	358	Gene3D	Vaccinia Virus protein VP39	109	358	IPR029063	-
	Aev03g0140	358	PANTHER	ISOFLAVONE 4'-O-METHYLTRANSFERASE	11	358	-	-
	Aev03g0140	358	PIRSF	O-mtase	3	358	IPR016461	GO:0008168
	Aev03g0140	358	PANTHER	O-METHYLTRANSFERASE	11	358	IPR016461	GO:0008168
	Aev03g0140	358	ProSiteProfiles	SAM-dependent O-methyltransferase class II-type profile.	27	358	IPR016461	GO:0008168
	Aev03g0140	358	Pfam	Dimerisation domain	37	85	IPR012967	GO:0046983
	Aev03g0140	358	Gene3D	-	8	107	IPR036388	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev03g0140	Aev-Chr3	1221711	1222877	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev03g0140	34	339	Monolignol Biosynthesis Gene Families	AT5G54160	34.069	1.47e-46	160

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev03g0140	K22588		K13259	gmx:106795493	562.377

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