Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0139 ATGGCGGGTTTGATCGATCTCAACACCACAGAGGACGATGAAACGCCGTCGTATGGTTCCTCTGCTGCTGCATCTTCTTCTTCCTCATCCTCACACTCGGGAACAAGTACTGCTTCAGCTCTTGCTCCTTCGGTGTGTTTGGAGCTTTGGCACGCGTGTGCGGGTCCAATGATCTCGTTGCCGAAGAAAGGAACCGTGGTAGTGTACTTCCCACAGGGACATTTTGAGCAAGTTCAGGATTTTTCTGTATCTGCCAGTAACAACATCCCAACCCATGTGTTCTGTCGCGTTCTCGATGTCAAGCTCCATGCAGAGGAAGGGAGCGATGAAGTATTTTGCCAGGTGTTGTTGGTTCCTGAAAATGAGCAAGTGGAGCAAAAATATCGGGAAGGGGAAATTGATGCTGATGGTGAAGAGGACAACAATGATGTGATGAAGTCAACAACACCCCACATGTTCTGCAAGACTCTGACAGCTTCTGATACTAGCACTCATGGCGGATTCTCTGTCCCTCGTCGAGCAGCTGAAGACTGCTTTCCTCCCCTGGATTACAGTCAACAGAGGCCTTCACAAGAGCTTGTAGCAAAGGATCTGCATGGCCGGGAATGGAAGTTTCGACATATTTACAGGGGGCAGCCACGCAGACATTTGCTTACAACAGGATGGAGTGCATTTGTGAACAAGAAGAAGCTTGTATCTGGAGACGCTGTCCTGTTTCTTAGGGGTGAGGATGGTGAACTGAGGTTGGGAATTCGTAGGGTGGCTCAATTGAAAAGTGGCGGCAACTTTTCTGCTCTCCCTGGCCAGCAATTGAACCATAGTTCTGTCATGGATGTGGTTAATGCTTTATCTACAAGATGTGCCTTCAGCATTCACTATAATCCTAGGGTCAGCACATCTGAGTTTATCTTACCTATCCACAAATTCTTAAAGAGCCTTAATTATTCATATGCGGTAGGAATGCGGTTCAAGATGCGTTTTGAATCTGAAGATGCTGCAGAGCGAAGATTTACAGGATTAGTTGTTGGGATTAATGATGTTGATCCTGTTAGATGGCCTGGATCACGATGGAAATGTCTACTGGTAAGGTGGGATGACATAGAAGCTACAAGGCATAATAACAGGGTTTCCCCATGGGAGATTGAGCCATCTGGTTCAGCTTCTGCTGCCAATAACCTGATGGCAGCTGGTTTGAAGAGGACCAAGATTGGATTGCCTTCAACAAAGCTAGAATTTCCAGTTCCCACCAATGGGATCAGGACATCAGACTTTGGGGAATCACTAAGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATTTTGGGTGTTAATAATCCCGTTGATGGTATTAATGCTCAGCGTCACCAGTTATCTGAATTAAGGAGATGCTATCCTGGGATCACTACAGCAGGACATAGTACAATCCCAGGGGTGAGTTCTGACGTTTCCTGCAATCGCATTGGCTTCGGTGAATCTTCACGATTCCAGAAGGTCTTGCAAGGTCAAGAAATACTTCCAAGCCAACCATATGGAAGAGCCTTGTCTATTGATGAGGCTGGTGGAAATGGTCGCTTTGGAGTTTTAGATGGTTACCAGATGCTAAGATCCAGAAATGGGTGGACGGCTCAGTTGAACAATTCTTCTCATTTGCATGCATCGATTCCGTCTGGGCAAGTGTCATCTCCATCATCTGTGTTAATGTTCCAGCAAGCAGCCAATCCAGTTTCAAACTCCGAATACAATAACAAAAGTAATCAAGTGATGGAAGGTAAAGCCCGTCGACGAGGTTCATATGCTTCTGAAGTGAAAGGTGGAATATTTGAACCATTCCCATCTCAAGAGACTATTTTCCATGGGCAAGCTCAAGATGGCTCAAATTCTTATAGTATTCTGAATTTACATAATCAGTTGGGCATTTCGCGATCACGGGAATCAACATCAGTAATGAGAGGCAGTACTCAAGATTTGGTTTCCTCATGTAAAAGTAGCTGCAGAGTCTTTGGTTTTTCGCTAACTGAGGGCGCCCCCATTGCAAATGAAGAGGCTCGACCCTCTACAGTCACTTGTCAATTAGATTCTGGCCCTTCATTCACAAGACATGTTGAAGATGATTTCCATTCAGGGCGTTTGAGTAAGAACAAGGCAGTCAGAAATAACTGCACCAAAGGCTTACTGCAGTGTTGA 2181 0.4562 MAGLIDLNTTEDDETPSYGSSAAASSSSSSSHSGTSTASALAPSVCLELWHACAGPMISLPKKGTVVVYFPQGHFEQVQDFSVSASNNIPTHVFCRVLDVKLHAEEGSDEVFCQVLLVPENEQVEQKYREGEIDADGEEDNNDVMKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGREWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRVAQLKSGGNFSALPGQQLNHSSVMDVVNALSTRCAFSIHYNPRVSTSEFILPIHKFLKSLNYSYAVGMRFKMRFESEDAAERRFTGLVVGINDVDPVRWPGSRWKCLLVRWDDIEATRHNNRVSPWEIEPSGSASAANNLMAAGLKRTKIGLPSTKLEFPVPTNGIRTSDFGESLRFQKVLQGQEILGVNNPVDGINAQRHQLSELRRCYPGITTAGHSTIPGVSSDVSCNRIGFGESSRFQKVLQGQEILPSQPYGRALSIDEAGGNGRFGVLDGYQMLRSRNGWTAQLNNSSHLHASIPSGQVSSPSSVLMFQQAANPVSNSEYNNKSNQVMEGKARRRGSYASEVKGGIFEPFPSQETIFHGQAQDGSNSYSILNLHNQLGISRSRESTSVMRGSTQDLVSSCKSSCRVFGFSLTEGAPIANEEARPSTVTCQLDSGPSFTRHVEDDFHSGRLSKNKAVRNNCTKGLLQC* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0139 726 Pfam B3 DNA binding domain 153 253 IPR003340 GO:0003677
Aev03g0139 726 CDD B3_DNA 151 253 IPR003340 GO:0003677
Aev03g0139 726 Gene3D - 151 254 IPR015300 -
Aev03g0139 726 SMART B3_2 153 255 IPR003340 GO:0003677
Aev03g0139 726 Gene3D - 317 391 - -
Aev03g0139 726 ProSiteProfiles B3 DNA-binding domain profile. 153 255 IPR003340 GO:0003677
Aev03g0139 726 PANTHER AUXIN RESPONSE FACTOR 36 725 - -
Aev03g0139 726 Pfam Auxin response factor 280 360 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aev03g0139 726 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 36 725 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aev03g0139 726 MobiDBLite consensus disorder prediction 10 34 - -
Aev03g0139 726 SUPERFAMILY DNA-binding pseudobarrel domain 145 264 IPR015300 -
Aev03g0139 726 MobiDBLite consensus disorder prediction 1 34 - -
Aev03g0139 726 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0139 Aev-Chr3 1200946 1205608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0139 152 506 B3 DNA Binding Superfamily AT2G33860 60.224 3.58e-146 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Aev03g0139 B3 5.3e-23 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0139 03 1200946 1205608 Aev03g0139 03 1200946 1205608 ECH