Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0135 ATGTATGTTTTGGAGCCAAAATCAAGAGAGGTAGAGATGACATGGTGCAATAACTCATCAGATCATGTAGAGAGGGGCATCGAGCTAATCACCCCTAATATCATTCCTATTACTAGTCCTACAACTAATGACGCTGTTAATAATGTAACTACTGCTAGTGCTACTCATCATCACACAAAACCACCCGAAATTCGAACCATTACTTGCCCCTCATGTGGCCATAACATCCAATTCCAAGATCAGGGTGGAATTCAAGACTTGCCGGGATTGCCAGCAGGAGTGAAGTTTGACCCGAATGACCAGGAGATACTTGAGCATTTGGATGCAAAGGTGCAGTCTGATGTGCGCAAATTGCATCCCCTTATTGATGAGTTCATACCCACTCTTGAAGGCGAGAATGGCATCTGTTATACTCACCCTGAAAAGCTACCAGGAGTGAACAAAGATGGACAGGTTCGTCACTTCTTTCACAGGCCATCAAAAGCGTACACAACAGGAACAAGGAAGAGAAGAAAGGTGCAGACGGAGGAGGAAGGAAGCGAGACAAGGTGGCACAAGACAGGGAAGACAAGGCCTATCAACGTGGGGGGAGCGGTGAAGGGTTTCAAGAAGATACTTGTGCTGTACACCAACTACGGGAGGCAGAAGAAGCCAGAGAAGACCAACTGGGTGATGCATCAGTACCATCTTGGCAGCAACGAAGAGGAGAAAGACGGCGAGTTAGTTGTCTCTAAGGTCTTTTATCAAACACAACCCAGGCAGTGTGGCAATTCCATCCTCATCAAGGACCCCTTTGAAGATAGTAGAGCCGTGATCATGACCACCCATCGTCACCACCACCACCACCGACACCCCAGTGCCGTCAACAACAACAACAGTTGCGATGAGATTGTTGCAGCAGCATTGCCCAAGAATAACAATAATGTGGATTATTACTACAGTAATAGTAATAGTAATATTCCGGGTGCAGCAGGTTTCATGAGTAGTTATGAACAAATGGTTGTTCATAATCATAATAGTAATAGGGAAAGCTCGCCGCAGCTTATTCCCAACATGGTTGTGCAAGGCAAACTCGTAAAGTCCTTCATTTGTGATTCACTCCCTCAAGACTATACTGTTTCTAGATGTATTTCAACAAATGACTGTATATCTTTATTATCATAG 1164 0.4485 MYVLEPKSREVEMTWCNNSSDHVERGIELITPNIIPITSPTTNDAVNNVTTASATHHHTKPPEIRTITCPSCGHNIQFQDQGGIQDLPGLPAGVKFDPNDQEILEHLDAKVQSDVRKLHPLIDEFIPTLEGENGICYTHPEKLPGVNKDGQVRHFFHRPSKAYTTGTRKRRKVQTEEEGSETRWHKTGKTRPINVGGAVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVVSKVFYQTQPRQCGNSILIKDPFEDSRAVIMTTHRHHHHHRHPSAVNNNNSCDEIVAAALPKNNNNVDYYYSNSNSNIPGAAGFMSSYEQMVVHNHNSNRESSPQLIPNMVVQGKLVKSFICDSLPQDYTVSRCISTNDCISLLS* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0135 387 Pfam No apical meristem (NAM) protein 91 230 IPR003441 GO:0003677|GO:0006355
Aev03g0135 387 ProSiteProfiles NAC domain profile. 90 249 IPR003441 GO:0003677|GO:0006355
Aev03g0135 387 Gene3D NAC domain 99 253 IPR036093 GO:0003677|GO:0006355
Aev03g0135 387 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 13 356 IPR044799 GO:0003700
Aev03g0135 387 SUPERFAMILY NAC domain 84 249 IPR036093 GO:0003677|GO:0006355
Aev03g0135 387 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 13 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0135 Aev-Chr3 1172804 1175891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0135 13 259 NAC Transcription Factor Family AT4G28500 68.952 6.44e-122 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev03g0135 NAM 6.8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0135 - - adu:107480763 445.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0135 03 1172804 1175891 Aev03g0135 03 1172804 1175891 ECH
Aev04g0532 04 3305058 3307356 Aev03g0135 03 1172804 1175891 ECH