Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0115 ATGCCAGCGCAGAAGCGCGTGCTGGTGGCCCTTAAGGAGCACGAGGATGCTCTGCGCGCCAACGACGTTGACAAAGTCGAGAAACCAGAAGATGAAGTCGAATCCGATCGAAGCAACTCTTGGAACAACGGCGACAAGGAGGAATATGTTTTTATAAAATTGTCTGATGTACGCAAGGAAGTTCAGTGCCCTATCTGTCTAGGCATCATTCGGAAAACGAGAACTGTAATGGAATGCCTCCATCGCTTTTGTAGAGAGTGCATAGACAAATCAATGCGCCTTGGTAACAATGAATGCCCTGCTTGCCGTACGCATTGTGCTAGCCGACGCTCTTTGAGAGATGACCCAAACTATGATGCCTTGATTGCTGCTCTCTATCCCAATATTGAAAAGTATGAAGAGGAGGAAGTGGCTTTACATGAGGATGAGGTAACTCACAATAAACAGATCCAAGCTTCCATTGCTCAGACTCTTCAACGACAGACAGAAGCATTAGGTAAGAAACGGAATGCTAAAGCAACAACAGCAACTTTTGTGAGGAGGTCACAAGGTAACCATCGAACTTCTTATCTGAGGAGAAGAAGAAACCTTAGAAATGCTGGTGAACTAGAGGTATCCAATGACAATGAGGATATGAATGATAATGATGAGATAAAGGGCTCATCTTCTGACGATGATCAGACAGAAACCAAACCAAAAAGATGCAAAAGAGAGGGAGAAGCACAGTTGCCTCAGCACTCGGCCTCTACTGATGCAGATATAGATGGTGAGGCAAATATTCCTGAAGTGGATAGAGAGATCATAACTTCATCTGGTACACTTTCCTGGGGAAAAAATGGCCACCGGAGTAACTCCCGAGTCAACAGTGGTGGTAAGAATTCCACAAACAGTACTCCTACCAAAGGCAGTCTTCCTACCAAAGGCAATCGCATCTCCAAATTGGTTGATCGACTCTGTAGCTCTGAAGATAATGATGACAAGTTGGGTATCTTTGTTGTGGTTGTCTCTTTGGATGAGCAAAGAATACCGAGTTTGCAGGAGCCATACCTTGAGTGCAAGCCTACTCTGTCAGTCAGTTCACTGAGCAAGCATATTGCGCTTAATACTGAGCTGCAGGCTGATGAAGTTGAATTATGCTTGATAGAAGAGCCGAGAGAGCCGCACGTCAGCATTTTAAGAGGTGAAAGAACAATTGATCCATATAAAGATGCTTTGCGTGTTCTAGCAGGACAAGAAACTTTGGCTGAACTTGGAAGTGATAATTTCATCCGTGGTTTTCTGCTCTTGGCTTATAGGAGGAAGTTGCAGAACTAA 1314 0.4452 MPAQKRVLVALKEHEDALRANDVDKVEKPEDEVESDRSNSWNNGDKEEYVFIKLSDVRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPNIEKYEEEEVALHEDEVTHNKQIQASIAQTLQRQTEALGKKRNAKATTATFVRRSQGNHRTSYLRRRRNLRNAGELEVSNDNEDMNDNDEIKGSSSDDDQTETKPKRCKREGEAQLPQHSASTDADIDGEANIPEVDREIITSSGTLSWGKNGHRSNSRVNSGGKNSTNSTPTKGSLPTKGNRISKLVDRLCSSEDNDDKLGIFVVVVSLDEQRIPSLQEPYLECKPTLSVSSLSKHIALNTELQADEVELCLIEEPREPHVSILRGERTIDPYKDALRVLAGQETLAELGSDNFIRGFLLLAYRRKLQN* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0115 437 SMART ring_2 63 102 IPR001841 -
Aev03g0115 437 MobiDBLite consensus disorder prediction 266 307 - -
Aev03g0115 437 PANTHER OS11G0578200 PROTEIN 1 436 IPR044592 -
Aev03g0115 437 MobiDBLite consensus disorder prediction 163 309 - -
Aev03g0115 437 SUPERFAMILY RING/U-box 48 134 - -
Aev03g0115 437 PANTHER OS11G0578200 PROTEIN 1 436 - -
Aev03g0115 437 CDD RING-HC_RING1_like 63 103 - -
Aev03g0115 437 ProSitePatterns Zinc finger RING-type signature. 79 88 IPR017907 -
Aev03g0115 437 MobiDBLite consensus disorder prediction 212 241 - -
Aev03g0115 437 Pfam Zinc finger, C3HC4 type (RING finger) 62 102 - -
Aev03g0115 437 ProSiteProfiles Zinc finger RING-type profile. 63 103 IPR001841 -
Aev03g0115 437 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 10 133 IPR013083 -
Aev03g0115 437 MobiDBLite consensus disorder prediction 20 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0115 Aev-Chr3 1047199 1051403 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0115 56 126 C3H Transcription Factor Family AT3G23060 33.784 1.57e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0115 K10695 - zju:107425269 448.358