Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0109 ATGAAGTTCAACATTGCAAATCCTACCACTGGATGCCAGAAGAAGCTTGAAATCGACGACGATCAGAAGCTACGGGCATTCTGGGACAAGAGGATCTCACAGGAGGTCATTGGTGATGCTCTGGGCGAGGAATTCAAAGGGTATGTCTTCAAAATCACTGGTGGGTGTGACAAACAAGGGTTCCCAATGAAGCAGGGAGTGTTGACCCCTGGTCGTGTGCGCCTCTTGCTTCACAGAGGAACTCCTTGTTTCCGTGGATATGGAAGGCGCAATGGAGAGCGCAGGAGAAAGTCCGTCCGTGGTTGCATTGTCAGTCCAGACCTCTCTGTTTTGAACTTGGTAATTGTGAAGAAGGGTGATGAGGAGCTTCCAGGCCTTACTGACATTGAGAAGCCAAGGATGAGGGGTCCAAAGAGAGCATCCAAAATCCGCAAGTTGTTCAACCTGTCAAAGGAGGATGATGTTAGGAAGTATGTTAACACCTACCGTCGAACCTTTACAACCAAAAATGGAAAGAAAGTGAGCAAAGCTCCTAAGATTCAACGACTGGTAACTCCTTTGACACTCCAAAGGAAGCGAGCAAGAATTGCTGATAAGAAGAAGAGAATTGCTAAGGCAAAATCAGATGCAGCAGAATATCAGAAGCTCCTTGCATCCAGGTTGAAGGAGCAGAGGGAACGCCGTAGTGAGAGCTTGGCAAAGAGGAGGTCCAAACTTTCTAGTGCAGCTGCCAAGCCAACTGCATAG 747 0.4793 MKFNIANPTTGCQKKLEIDDDQKLRAFWDKRISQEVIGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGDEELPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKNGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSDAAEYQKLLASRLKEQRERRSESLAKRRSKLSSAAAKPTA* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0109 248 PIRSF RPS6e 1 248 IPR014401 GO:0003735|GO:0005840|GO:0006412
Aev03g0109 248 PANTHER 40S RIBOSOMAL PROTEIN S6 1 247 IPR001377 GO:0003735|GO:0005840|GO:0006412
Aev03g0109 248 Coils Coil 189 216 - -
Aev03g0109 248 MobiDBLite consensus disorder prediction 222 248 - -
Aev03g0109 248 PANTHER 40S RIBOSOMAL PROTEIN S6 1 247 - -
Aev03g0109 248 SMART Ribosomal_S6e_2 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Aev03g0109 248 Gene3D - 133 234 - -
Aev03g0109 248 Pfam Ribosomal protein S6e 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Aev03g0109 248 ProSitePatterns Ribosomal protein S6e signature. 52 63 IPR018282 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0109 Aev-Chr3 994706 996735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0109 1 248 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 73.387 9.19e-123 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0109 K02991 - gmx:100800507 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0109 03 994706 996735 Aev04g0562 04 3501456 3503235 PCT