Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0094 ATGATGATGATGCATAGTGACGAAGTAAAGAAAGAAGACGACGATGAAGGTCCACCACCAGGGTGGAAACCCATTCAAACACCACCGCCGCCGTCGCAGCCGCAGCCACAGTCACAGCCACCGCCAAAGCCTCACCCACGTCCATCCAATTTGGGTCAAATGGTTTGTGGTTCTTGCCAACGTCTGCTTGCATATCCACGCGGTGCCAAACAGGTTCAATGTGCGAGCTGCCAGACAGTCAACATTGTATTAGAAGTTGATCAAGTTGGGCAAGTTAAGTGTGGAGGCTGTGCAGTTTTGCTAATGTATCCATTTGGTGCTCCACAAGTTAGGTGTTCCTCATGTCGATTCGTGACAGAAATAGGGGCACACAACAAGCGGCCTCCATGGTCTGTACAACAAAAGAAGCCAACTCCTCCCAAAACTGTTTGTTAG 435 0.4966 MMMMHSDEVKKEDDDEGPPPGWKPIQTPPPPSQPQPQSQPPPKPHPRPSNLGQMVCGSCQRLLAYPRGAKQVQCASCQTVNIVLEVDQVGQVKCGGCAVLLMYPFGAPQVRCSSCRFVTEIGAHNKRPPWSVQQKKPTPPKTVC* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0094 144 MobiDBLite consensus disorder prediction 1 19 - -
Aev03g0094 144 PANTHER PROTEIN LOL2 4 141 - -
Aev03g0094 144 MobiDBLite consensus disorder prediction 1 52 - -
Aev03g0094 144 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 91 119 IPR005735 -
Aev03g0094 144 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 53 83 IPR005735 -
Aev03g0094 144 Pfam LSD1 zinc finger 56 80 IPR005735 -
Aev03g0094 144 Pfam LSD1 zinc finger 94 118 IPR005735 -
Aev03g0094 144 MobiDBLite consensus disorder prediction 21 48 - -
Aev03g0094 144 PANTHER PROTEIN LSD1 4 141 IPR040319 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Aev03g0094 zf-LSD1 3.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0094 - - gmx:100780865 214.927