Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0080 ATGTATGTGGCTTCCATGAGAAAGTCTTTCAAGGATTCCTTGAAGGTCCTTGAAGCTGATATCCAGCATGCCAATACCCTGGCCTCAGATTTTCCGAGGGAGTATGATGGCGCTTCCCTTCAGATGAGATTGTCATACAGTCCAGCTGCACACCTCTTTCTATTTCTGGTGCAATGGACTGATTGTAATCTTGCCGGTGCCCTTGGACTGCTGAGGATCCTAATTTACAAGGTTTATGTGGATGGGACAACCACCATGTCTACTCATGAAAGAAAAGCAAGTATCAGAGAGTTCTATGCTGTCATTTATCCCTCTTTGATGCAACTTCAGAAAGGTGTTTCTGATACAGAGGATAAGAAGCAAAAGGCTGTATGCATGGAGAGGTATCGTAGAAGAGATGATGAAGAATATAGGCAATCTTCTGATATTGACATTGAAAGGGAAGATGAATGTGGAATATGTATGGAGATGAATAGTAAGATTGTGCTCCCCAACTGCAATCATGCCATGTGCCTGAAGTGTTACCGAGAATGGAGAACAATCTCACAGTCATGCCCATTTTGCCGAGACAGCTTGAAGAGAGTGAACTCGGGCGATCTCTGGGTATTAACGGAGCGGAGGGATGTAGTGGATATGGCAACCGTGACAAGGGAGAATCTGAGAAGGCTTTTCATGTACATAGACAAGTTGCCTCTTATTGTTCCAGACTCCCTTTTTGACACATATGACTCTCACATAAGGTAA 744 0.4382 MYVASMRKSFKDSLKVLEADIQHANTLASDFPREYDGASLQMRLSYSPAAHLFLFLVQWTDCNLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLMQLQKGVSDTEDKKQKAVCMERYRRRDDEEYRQSSDIDIEREDECGICMEMNSKIVLPNCNHAMCLKCYREWRTISQSCPFCRDSLKRVNSGDLWVLTERRDVVDMATVTRENLRRLFMYIDKLPLIVPDSLFDTYDSHIR* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0080 247 SUPERFAMILY RING/U-box 140 194 - -
Aev03g0080 247 ProSitePatterns Zinc finger RING-type signature. 166 175 IPR017907 -
Aev03g0080 247 PANTHER PEROXISOME BIOGENESIS FACTOR 10-LIKE 3 246 - -
Aev03g0080 247 SMART ring_2 151 188 IPR001841 -
Aev03g0080 247 PANTHER RING FINGER PROTEIN 41, 151 3 246 - -
Aev03g0080 247 ProSiteProfiles Zinc finger RING-type profile. 151 189 IPR001841 -
Aev03g0080 247 Pfam Zinc finger, C3HC4 type (RING finger) 148 194 - -
Aev03g0080 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 141 198 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0080 Aev-Chr3 822209 824892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0080 122 189 Glycosyltransferase AT5G37200 31.507 5.08e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0080 K25840 - gmx:100777318 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0080 03 822209 824892 Aev04g0600 04 3700764 3704011 PCT