Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0056 ATGAATTATCCTCTTGCTATATATATTTCTAATGGTGTATGTGGCGGCAGAGATAGAAAGAGACATCACTCTCATCATATATATATATATATATATATATATATATACACACACACTCTGGTATGTAGCAATGCATTACAGAACATAACAGAGGAAATGGAAAGTGAGATAGTGAGCTCTGAATGGCAAAGGGTACAGTCAGAATCAGAAGAAAATCCAAACATCTATGTCAAAGTTAAGCCACCTGTTACACTCAAGTTTGAAGATATTGTATATGAAGCCAAAATCAGCAAAGAGTTAGGCTTGTTCTGCAGAAAGGAGGTAGGTTCTGAATCTGAGGATTACAAACTAATCTTGAAAGGTGTTAGTGGTGCTGTTTTCCCTGGCGAAGTGTTGGCAATTTTAGGCCCTTCTGGCAGTGGCAAAACAACTCTGATCAATGCTTTGGGAGGCCGGTTAAATCATATCACCAGAGGAACCATAACATACAATGGCAAGCCCCTCTCAAAATCAGTGAAACAGAATTTGGGATTTGTTTCCCAGCAAGATCTGTTCTATCCTCACTTATCAGTCACTGAGACACTGGTCTTTTCGGCTCTTCTTCGCCTGCCGAATAGCCTCACGAAACAAGAGAAAATCTCAAATGCTGAAGCAGTTATGAGTGAACTTGACCTGATTCATTGTAAGGACACTATAATGGGAGGGCCACTCATAAAGGGTGTCTCAGGTGGAGAAAGGAAGAGGGTGAGTATAGGGCAAGAACTGTTGACCAATCCAAGCCTATTGCTTGTTGATGAGCCAACTTCAGGTCTTGACTCAACCACAGCTAGGAGAATTGTGCTGACTCTCTGTGATTTAGCCAAAGCTGGAAGAACTGTTGTAATGACAATTCACCAGCCTTCTAGTAAGCTCTTTTACATGTTTCAGAAGATTTTGCTGTTATCAGATGGTAGTACCATGTACTTTGGGAAGGGAGAATCTGTCATGGATTACTTCTCTGGCATCGGATATGCCCCTTCTATACCCATGAATCCTACAGATTTTCTGCTTGATCTTGCAAGTGGTATATATGGTGGGAATTCAGAAGAGGATGCTAATTCTACCAAACAAGTCCTATTATCAGCTTTTGAAAGTAACCTTGCAAGCCAAGTAAAGATGGAACTTCAAAATTGCAGAGTTGCATCTCATGATGACAGTTCAGAATATGAGATATCTGGCCAATGTTGCACAACTTGGTGGCAGCAATTTACTGTATTACTAAGAAGGGGTTTCAAAGAGAGAAAGTATGAACAATTTTCAGTCCTCAGAATCATCAAGGTTACGGCTGCCTCACTCGTTGCAGGCCTACTCTGGTGGCAGACCAGAGCTGATCAAATACAAGACCTGGTGGCACTACTTTTCTACTACACACAATTCGCTGGTTATTTTCCTTTGGGGCAATCAATCTTCACATTTCCTGATGATCATGAAATGCTAATAAAGGAAACATCTTCCTGCATCTATAGACTTTCAGCTTACTTCATAGCAAGTAATTTTGTTGACATTCCAGCACAGATAGCATTACCAACACTATTCATCACCATTACTTATTGGATGGCAGGGCTAAAAGCCAATGCTTTGGTTTTCTTCCATACTCTATCTATTGTTCTTCTATATTGCTTTGTATCCCAGGGTCTTGCATTAGCTATTGGTGCAATAGTGATAAAGAACCCAAAAGCAGCTTCTACTTCTGGAGCAGTAGTCATGACTTTATTTTTTCTAGCCAATGGTTTCTTTCTTCAGAATATTGCAGAATTTATGTCATGGATAAAGTACACATCTCCTAGCTATTATTCCTATAAGCTCTTGCTGGGGTCACAGTTTAAGGATGGTGACAGTTACAGATGTGGTCAAAATGTCACATGCTTTGTTAGGAACTACCCTGTAATTAAGCATGTAGGCCTTGACAAGCAAGGTTTCTCTGCTTTTGCATTGCTGGCAATGCTTGTTGGATATAGACTTGTTGCCTATTTTGCCCTTATGGTTCTTATCAAACATAATTAG 2043 0.4004 MNYPLAIYISNGVCGGRDRKRHHSHHIYIYIYIYIYTHTLVCSNALQNITEEMESEIVSSEWQRVQSESEENPNIYVKVKPPVTLKFEDIVYEAKISKELGLFCRKEVGSESEDYKLILKGVSGAVFPGEVLAILGPSGSGKTTLINALGGRLNHITRGTITYNGKPLSKSVKQNLGFVSQQDLFYPHLSVTETLVFSALLRLPNSLTKQEKISNAEAVMSELDLIHCKDTIMGGPLIKGVSGGERKRVSIGQELLTNPSLLLVDEPTSGLDSTTARRIVLTLCDLAKAGRTVVMTIHQPSSKLFYMFQKILLLSDGSTMYFGKGESVMDYFSGIGYAPSIPMNPTDFLLDLASGIYGGNSEEDANSTKQVLLSAFESNLASQVKMELQNCRVASHDDSSEYEISGQCCTTWWQQFTVLLRRGFKERKYEQFSVLRIIKVTAASLVAGLLWWQTRADQIQDLVALLFYYTQFAGYFPLGQSIFTFPDDHEMLIKETSSCIYRLSAYFIASNFVDIPAQIALPTLFITITYWMAGLKANALVFFHTLSIVLLYCFVSQGLALAIGAIVIKNPKAASTSGAVVMTLFFLANGFFLQNIAEFMSWIKYTSPSYYSYKLLLGSQFKDGDSYRCGQNVTCFVRNYPVIKHVGLDKQGFSAFALLAMLVGYRLVAYFALMVLIKHN* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0056 680 SMART AAA_5 128 318 IPR003593 -
Aev03g0056 680 CDD ABCG_EPDR 82 323 - -
Aev03g0056 680 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 85 341 IPR003439 GO:0005524
Aev03g0056 680 Pfam ABC-2 type transporter 414 621 IPR013525 GO:0016020|GO:0140359
Aev03g0056 680 Gene3D - 106 334 IPR027417 -
Aev03g0056 680 ProSitePatterns ABC transporters family signature. 241 255 IPR017871 GO:0005524
Aev03g0056 680 Pfam ABC transporter 119 269 IPR003439 GO:0005524
Aev03g0056 680 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 57 677 - -
Aev03g0056 680 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 57 677 - -
Aev03g0056 680 Pfam ABC-2 type transporter 298 367 IPR043926 GO:0140359
Aev03g0056 680 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 331 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0056 Aev-Chr3 662456 664942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0056 118 302 Calmodulin-binding Proteins AT2G36910 29.534 4.97e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0056 K05681 - gmx:100800295 887.486