Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0055 ATGGATAATGTTACATTAAAGCTGACAAGTTTATACACCTTGGCTATTTTACTACTTTCTCTGTCTCTTAATTGTCCTGTTGTTTTCTCCTCTAGACACAGGCAATATAATTGGAGGAAACTCAGCTCTGCAGACCAGTTGGATAATAATAATGATAATAATAATAATAGTGATGATCTTGTTACTAACTTGCCTGGCCAGCCTGCTGTGGATTTCAGGCACTATGCTGGTTATGTCACTGTCAATGAAACCAATGGAAGAGCACTCTTCTACTGGTTCTATGAGGCTATGTCCTTGCCAGAAGAAAAGCCATTGGTGCTCTGGCTTAATGGAGGTCCTGGGTGCTCTTCTGTGGGATATGGAGCAACACAGGAGATTGGTCCATTTTTAGTTGACACTGATGGCCATGGCCTCGAATTCAATAACTTCTCATGGAACAAAGAAGCCAACATGTTATTCCTGGAATCTCCTGTTGGAGTTGGGTTTTCCTACTCAAATACAACCAGTGACTATGATCAACTGGGAGATGATTTCACAGCTAATGATGCTTACACTTTTCTGCACAATTGGTTCCTAAAGTTTCCATCATATAGAACAAGGACATTTTACATAGCAGGGGAGAGTTATGCAGGAAAGTATGTGCCAGAGCTAGCTGAACTCATCCATGATAGGAACATGGACCCGTCCCTTCATATTGATCTCAAGGGTATTTTGCTTGGTAACCCTGAAACATCTGATCCAGAGGATTGGATAGGACTAGTTGATTATGCTTGGAGCCATGCTATAATATCTGATGAAACACAGAAAACAATAAAAAGAAGCTGTGACTTTAACAGCAGTGATCCATGGCGCAATGAAGATTGTAGTGATGCAGTAGATGAAGTTCTCAAACAGTACCATGAAATTGATATCTACAGCCTCTACACATCCACATGCTTCGCCTCCACAGCGCGTTCAAATGGCAAATCATCTTCCATGAAGCGCTCATCTACAATGATGCCTAGGATGATGGGGGGTTATGACCCATGTCTGGATGATTATGCTAAGGCCTTTTACAACAGACCAGATGTTCAGAAGGCACTTCATGCTGGTGATGGTCACAGTCTAAAGAATTGGAGCATTTGCAACGACGATATATTCAATGACTGGGCAGATTCAAAGCCATCTGTTATCCCAATATACAGGAAGCTTATTTCAGCGGGACTTAGGATCTGGGTTTACAGCGGAGACACAGATGGAAGAGTACCAGTGCTCTCGACAAGGTACAGCTTAAGCTCTCTAGCTCTGCCTGTCACTAAGCCATGGCGACCTTGGTACCATGAAAATGAGGTGAGTGGGTGGTATGAAGAATATGAAGGGCTTACATTTGCAACATTTAGAGGAGCAGGCCATGCAGTACCCTGTTTCAAACCAAGCAGCTCTCTTGCCTTCTTCTCCTCCTTTCTCCGCGGACAATCACCGCCTTCTACTAAATAA 1476 0.4295 MDNVTLKLTSLYTLAILLLSLSLNCPVVFSSRHRQYNWRKLSSADQLDNNNDNNNNSDDLVTNLPGQPAVDFRHYAGYVTVNETNGRALFYWFYEAMSLPEEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGHGLEFNNFSWNKEANMLFLESPVGVGFSYSNTTSDYDQLGDDFTANDAYTFLHNWFLKFPSYRTRTFYIAGESYAGKYVPELAELIHDRNMDPSLHIDLKGILLGNPETSDPEDWIGLVDYAWSHAIISDETQKTIKRSCDFNSSDPWRNEDCSDAVDEVLKQYHEIDIYSLYTSTCFASTARSNGKSSSMKRSSTMMPRMMGGYDPCLDDYAKAFYNRPDVQKALHAGDGHSLKNWSICNDDIFNDWADSKPSVIPIYRKLISAGLRIWVYSGDTDGRVPVLSTRYSLSSLALPVTKPWRPWYHENEVSGWYEEYEGLTFATFRGAGHAVPCFKPSSSLAFFSSFLRGQSPPSTK* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0055 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 141 153 IPR001563 GO:0004185|GO:0006508
Aev03g0055 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 454 467 IPR001563 GO:0004185|GO:0006508
Aev03g0055 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 190 215 IPR001563 GO:0004185|GO:0006508
Aev03g0055 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 154 164 IPR001563 GO:0004185|GO:0006508
Aev03g0055 491 PANTHER CARBOXYPEPTIDASE 11 487 - -
Aev03g0055 491 ProSitePatterns Serine carboxypeptidases, serine active site. 204 211 IPR018202 GO:0004185
Aev03g0055 491 Pfam Serine carboxypeptidase 66 484 IPR001563 GO:0004185|GO:0006508
Aev03g0055 491 SUPERFAMILY alpha/beta-Hydrolases 56 486 IPR029058 -
Aev03g0055 491 Gene3D - 343 379 - -
Aev03g0055 491 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 487 IPR001563 GO:0004185|GO:0006508
Aev03g0055 491 Gene3D - 390 484 - -
Aev03g0055 491 Gene3D alpha/beta hydrolase 55 314 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0055 Aev-Chr3 655423 658593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0055 348 485 Calmodulin-binding Proteins AT2G22960 35.971 8.18e-18 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0055 K16297 - gmx:100815993 830.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0055 03 655423 658593 Aev04g0622 04 3861900 3865457 PCT