Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g2354 ATGGTTGCCCTTGTCTCATACTCCGAAGTCTCAACCGCAGCACTGGAATTAGCTGACCGAGAACAAGTAATGGATCGCTTTTTCCCTGAGAGACTTCTGGGCGAGATATTCTGGGATGACGCACCTTCTTCAGCTACCAACAACCAAAGTGGTCCTGTTCAGCATTCCCAGTTGGTCATCAAGGCTGAACCTTCCCCCCCTGCAAATCACAGCGCTTTCATTCAGTATAGAGACCTTGCGGAAGAAAGTTCTCCAAACGCGTCACATTCCCACAGCATGAGCATGAGAATGATTGCATTCTTGAGAAAGAATTGGCCTGTAGAGAGAAATAATAAGGCGGCAGAACTCGAAAGAGAACGCTGTTTTAGGCACATGATCAGTGAAAGGATGAGAAGGCAGAGGCAGAGACAGTGTTGCTTGGCTCTCCATTCAATGCTTCCTCATGGAACCAAAACAGATAATAATTCTGTAATTCAGATGGCTGCTAAGGAGATTCAACGGCTGCAGGCATGCAGAGAAGAGTTGTTGAGCAAAAATTGTTTGCTTGAAGCTGCTGCTATTGAGAGCAGCCAAGTTGGGGGAAGTAAACTTCAATACTTGAGAGTGCCATATCCTAAATCTGGAACCGATTCAATGGTTGAGGCCCTCAAATGCTTGAAAGCCCACTGTGTGGATACCAGAAGCATCAAATCAAACTTCTCCCAGGAAGAGCTGTTCGCTGTGTTGGAGACTGAAACCACTAGCAAGATTGAAGATGCTGAGGTGGAAAGGGCTATTCAGAGAACGCTGGACGAAGTTGAGTGGAAGCTTCATTCCCAAGTCAAGGATGGTTTCAAAAGACAGAGATTAGACTGA 855 0.462 MVALVSYSEVSTAALELADREQVMDRFFPERLLGEIFWDDAPSSATNNQSGPVQHSQLVIKAEPSPPANHSAFIQYRDLAEESSPNASHSHSMSMRMIAFLRKNWPVERNNKAAELERERCFRHMISERMRRQRQRQCCLALHSMLPHGTKTDNNSVIQMAAKEIQRLQACREELLSKNCLLEAAAIESSQVGGSKLQYLRVPYPKSGTDSMVEALKCLKAHCVDTRSIKSNFSQEELFAVLETETTSKIEDAEVERAIQRTLDEVEWKLHSQVKDGFKRQRLD* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g2354 284 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 24 274 IPR044658 -
Aev02g2354 284 PANTHER TRANSCRIPTION FACTOR BHLH92 24 274 - -
Aev02g2354 284 Gene3D - 114 178 IPR036638 GO:0046983
Aev02g2354 284 SMART finulus 125 174 IPR011598 GO:0046983
Aev02g2354 284 Coils Coil 158 178 - -
Aev02g2354 284 Pfam Helix-loop-helix DNA-binding domain 123 169 IPR011598 GO:0046983
Aev02g2354 284 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 111 179 IPR036638 GO:0046983
Aev02g2354 284 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 119 168 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g2354 24 246 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 35.593 3.58e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev02g2354 HLH 1e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g2354 - - gmx:100815874 295.434