Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g2336 ATGAGCAGCAGTAGTGAAGGTCCAGTGGTTGGTCCTCCTCCTGCTCCTGCTCAAGCAATGGCAATGGCAATGGAGGGGCTTCATGAGAATGGTCCTCCACCATTCCTGACAAAGACATATGAGATAGTTGATGATGTTTCCACTAACCAGATTGTTTCATGGAGCAAAGGGAACAACAGCTTCGTTGTGTGGGATCCTCAGGCATTCTCCATCTCTCTTCTCCCGCGATACTTCAAGCACAACAACTTCTCCAGCTTTGTTAGGCAGCTTAACACCTATGGGTTTAAAAAGGTGGATCCAGATAGGTGGGAGTTTGCTAATGAAGGCTTTCTGAGAGGGCAAAGGCATCTTCTGACGAGCATAAGGAGGAGGAAGACAACACAGTCAGCACATCATAATCAATCTCTGGTGGACCCTTGTTGTGTCGAAGTTGGTAGGTTTGGATTGGATGGAGAAGTTGATAGGTTGAGGCGCGACAAGCAAGTGCTCATGTTGGAGCTTGTGAAGCTGAGGCAGCAGCAGCAGAGCACAAGAGTGCAGATTCAATCCATGGAAGATAGGCTTAGAAAGACAGAGCACAAGCAGAGGCAGATGATGAGCTTCTTGGCAAGGGCAATGCAGAACCCCAACTTTGTGCACCAATTGCTTCACCAGAATGAGTGGAGGAAGGAGCTTGAGGAAGCTCTTTCCAACAAGAGAAGGAGAAGGACTATTGATCAAGGGCCTGCTGGTGGTGATGATGATGATCAAGAGTGCTCAGCTTTTGTGAAACTTGAAGAGCAGGCCTACTCTGAAGACATGTCAGAGCTTGAGGGTTGTGGTGGTGACATGGACCTTGATGCTATGAACAATGTGCAAGAGGAACAGATTGTTGGTAGCCAGAAGAAGCTAGAAGAAGTTGAGATTGAAAGTGGTGGAAATGATGAAGGCATTATTGATGAACAAGTGTTTTGGGAAGAGTTTCTGAATAATGAGAATACACAGGGTAGCAATGGAGAAGATCATGACCATGATGATGATATAAATCTGTTAGCTGAGGAACTTGGCTATTTAGCCTCAGGTCATCCTAAATGA 1074 0.4618 MSSSSEGPVVGPPPAPAQAMAMAMEGLHENGPPPFLTKTYEIVDDVSTNQIVSWSKGNNSFVVWDPQAFSISLLPRYFKHNNFSSFVRQLNTYGFKKVDPDRWEFANEGFLRGQRHLLTSIRRRKTTQSAHHNQSLVDPCCVEVGRFGLDGEVDRLRRDKQVLMLELVKLRQQQQSTRVQIQSMEDRLRKTEHKQRQMMSFLARAMQNPNFVHQLLHQNEWRKELEEALSNKRRRRTIDQGPAGGDDDDQECSAFVKLEEQAYSEDMSELEGCGGDMDLDAMNNVQEEQIVGSQKKLEEVEIESGGNDEGIIDEQVFWEEFLNNENTQGSNGEDHDHDDDINLLAEELGYLASGHPK* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g2336 357 PRINTS Heat shock factor (HSF) domain signature 35 58 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev02g2336 357 PRINTS Heat shock factor (HSF) domain signature 86 98 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev02g2336 357 PRINTS Heat shock factor (HSF) domain signature 73 85 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev02g2336 357 Gene3D - 27 126 IPR036388 -
Aev02g2336 357 MobiDBLite consensus disorder prediction 230 250 - -
Aev02g2336 357 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 18 341 - -
Aev02g2336 357 Coils Coil 283 303 - -
Aev02g2336 357 ProSitePatterns HSF-type DNA-binding domain signature. 74 98 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev02g2336 357 Pfam HSF-type DNA-binding 35 124 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev02g2336 357 MobiDBLite consensus disorder prediction 323 343 - -
Aev02g2336 357 Coils Coil 153 187 - -
Aev02g2336 357 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 18 341 IPR027725 -
Aev02g2336 357 SUPERFAMILY "Winged helix" DNA-binding domain 30 124 IPR036390 -
Aev02g2336 357 SMART hsfneu3 31 124 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g2336 Aev-Chr2 24081759 24082917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g2336 24 353 HSF AT3G22830 52.210 1.35e-122 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Aev02g2336 HSF_DNA-bind 2.3e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g2336 K09419 - gmx:100809515 382.104