Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g2328 ATGGAGAAAGGGAAAGAGAAGATGAAAAGAAGCTTGTCAGAGAAGCTAGACACATTTTTGAGGCTAAACAGACACATTTTTGAAAAAGGACTTGTGAGGCCCAAAAGACTTGTGAGGCCCAAAAGACTTCAGCAGAAGAAGAACGAAGCAGACGTCAACATGGGGAAGACACGTGGAATGGGAGCTGCCCGCAAGCTGAAGTCCCATCGTAGAAGGCAAAGGTGGGCTGATAAGGCCTACAAGAAATCCAATCTTGGCAATGAATGGAAGAAGCCTTTTGCTGGATCATCCCATGCAAAGGGAATTGTTCTTGAGAAAATTGGTATTGAAGCTAAGCAGCCCAACTCTGCTATCCGTAAGTGTGCGAGGGTTCAACTCATCAAGAATGGGAAGAAGATTGCTGCATTTGTGCCAAATGATGGTTGCTTGAACTACATCGAAGAGAATGATGAAGTTTTGATAGCTGGATTTGGTCGTAAGGGTCATGCTGTGGGAGATATTCCTGGTGTCAGGTTCAAGGTTGTGAAGGTCTCTGGTGTTTCTCTCTTGGCACTTTTCAAGGAGAAGAAGGAGAAGCCAAGGTCTTAA 588 0.449 MEKGKEKMKRSLSEKLDTFLRLNRHIFEKGLVRPKRLVRPKRLQQKKNEADVNMGKTRGMGAARKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g2328 195 Pfam Ribosomal protein S12/S23 85 194 IPR006032 GO:0003735|GO:0005840|GO:0006412
Aev02g2328 195 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 47 195 IPR006032 GO:0003735|GO:0005840|GO:0006412
Aev02g2328 195 PANTHER BNACNNG03140D PROTEIN 47 195 - -
Aev02g2328 195 TIGRFAM uS12_E_A: ribosomal protein uS12 59 194 IPR005680 GO:0003735|GO:0006412|GO:0015935
Aev02g2328 195 SUPERFAMILY Nucleic acid-binding proteins 73 193 IPR012340 -
Aev02g2328 195 Gene3D - 78 195 IPR012340 -
Aev02g2328 195 CDD Ribosomal_S23 79 192 IPR005680 GO:0003735|GO:0006412|GO:0015935
Aev02g2328 195 ProSitePatterns Ribosomal protein S12 signature. 112 119 IPR006032 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g2328 Aev-Chr2 24047599 24049402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g2328 54 195 Cytoplasmic Ribosomal Protein Gene Family AT5G02960 95.070 8.61e-95 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g2328 K02973 - twl:119995137 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g2328 02 24047599 24049402 Aev02g2328 02 24047599 24049402 ECH