Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g2317 ATGGGTAACATAGGAAGCAGCAGCGGAAGCAACCGCCGGAGGCACGGTAGCGGAAATGGCGGAAATGGGCGGCGGATTCATCCTCCGCCGCCTCCTCCTCAGGCGGTGACGCCGCAGCCGGAAATCACGGCGAACCGGTTCGTGTACCCTGCCGCCGCCACTCCATACCATAACTACCCAGGTTACTACCCACCGCCGGTGCCGTTGCCGGCTCCGTACGACCATCACCACCGTACGGCGGTGGAGCCGATGTGGGGTCGGTACCCTGCGGCGGTGCCTCCGCCACCGCCGGCACCCTATGTGGAGCATCAGAAGGCACTTACTATAAAGAATGATGTGAACATAAAGAAGGAGACTCTGAGGATCGAGGTTGATGAGGAGAACCCAGGGAAGTTCCTTGTGTCTTTCACATTTGATGCAACCGTTTCTGGGAGCATCACCATACTTTTCTTTGCAAAAGAAGGTGAAGGATGTGTCCTTACACCAATGAAGGAAAGTATTCTTGCACCAGTGACTGTAAATTTCCAGGAAGGTCTTGGCCAGAAGTTTAGACAGCGAGCTGGTACTGGTATCGATTTTTCACTGTTTGAGGAATCTGAGTTATTGAAAGTGAGTGACCAGAATGTCTATCCTCTAGCAATTAAGGCTGATGCATCTTCTGGTGATCATGATGGATCGAATGAGACTCCAGCATCCTGTGATGGATTGAATGAGACTCCGGCATCTCATGATGGATTGAAGGTGGTTCCAACATCTAATGATGGATCAAATGAGGTTCCAACATCTAATGATGGATCAAATGAGGTTCCAACGTCTAATGATGGTTCGAATGAGGTTCCAATGGCTAATGATGGGCCGAATGAGGTTCCAACATCTCATGATGGGATAAATGAGAATACAACATCTCATGATGGATCAAATGAGACTCTGACATCTGGTAACACAAACTCTCAGATAACTCAAGCAGTGTTTGAGAAGGAGAAAGGGGAATTCCAGGTGAAGGTTGTTAAGCAGATCTTGTGGGTGAATAAAAGAAGGTATGAGCTGCAGGAGATATATGGTATTGGAAACTCGGTCGAGAGTGACTTGGATGAGAACGATCCCGGAAAAGAGTGTGTTATCTGTCTATCGGAGCCTAGGGATACAACTGTCCTACCATGCCGTCATATGTGCATGTGTAGCGGATGCGCAAAGGTTTTGAGGTTCCAGACGAATCGATGTCCAATCTGCAGACAACCAGTTGAGAGGCTTTTGGAGATCAAAGTAGGGCCTGAACCTCAGGAGTGA 1287 0.4911 MGNIGSSSGSNRRRHGSGNGGNGRRIHPPPPPPQAVTPQPEITANRFVYPAAATPYHNYPGYYPPPVPLPAPYDHHHRTAVEPMWGRYPAAVPPPPPAPYVEHQKALTIKNDVNIKKETLRIEVDEENPGKFLVSFTFDATVSGSITILFFAKEGEGCVLTPMKESILAPVTVNFQEGLGQKFRQRAGTGIDFSLFEESELLKVSDQNVYPLAIKADASSGDHDGSNETPASCDGLNETPASHDGLKVVPTSNDGSNEVPTSNDGSNEVPTSNDGSNEVPMANDGPNEVPTSHDGINENTTSHDGSNETLTSGNTNSQITQAVFEKEKGEFQVKVVKQILWVNKRRYELQEIYGIGNSVESDLDENDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVGPEPQE* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g2317 428 MobiDBLite consensus disorder prediction 1 40 - -
Aev02g2317 428 PANTHER MAHOGUNIN 1 233 IPR045194 GO:0061630
Aev02g2317 428 MobiDBLite consensus disorder prediction 249 280 - -
Aev02g2317 428 PANTHER E3 UBIQUITIN-PROTEIN LIGASE 302 428 - -
Aev02g2317 428 SUPERFAMILY RING/U-box 371 416 - -
Aev02g2317 428 ProSiteProfiles Zinc finger RING-type profile. 372 411 IPR001841 -
Aev02g2317 428 MobiDBLite consensus disorder prediction 290 314 - -
Aev02g2317 428 MobiDBLite consensus disorder prediction 217 314 - -
Aev02g2317 428 PANTHER E3 UBIQUITIN-PROTEIN LIGASE 1 233 - -
Aev02g2317 428 CDD mRING-HC-C3HC5_MGRN1_like---blasttree 371 411 IPR045195 -
Aev02g2317 428 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 355 421 IPR013083 -
Aev02g2317 428 SMART ring_2 372 410 IPR001841 -
Aev02g2317 428 Pfam Zinc finger, C3HC4 type (RING finger) 370 416 - -
Aev02g2317 428 PANTHER MAHOGUNIN 302 428 IPR045194 GO:0061630
Aev02g2317 428 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g2317 Aev-Chr2 23992207 23994265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g2317 312 391 C3H Transcription Factor Family AT3G09770 76.190 5.42e-34 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g2317 - - aip:107626498 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g2317 02 23992207 23994265 Aev02g2317 02 23992207 23994265 ECH
Aev06g0252 06 1868855 1871278 Aev02g2317 02 23992207 23994265 PCT