Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g2315 ATGATGCAAACTGAAGCAGCAACTGAAGGCAATCATAGTAAGGACAATTGTGAAAAAAGAGCTGATACCCCAATTCAAAAGGGTTTAGATTCATCAGAAATAACTGAGGAACTTCCAAGTGGACAACATGGGACTAGGAAAAACCTCATCTTGGAGATACCTACCACAAGCATTCTTGAGGAAGCAAGAGAAGATTTCTTGAGGATAGATATGCCTCTAACTCCACCTCCAAGAAGAGTGAACTTTTCGCCGTGTCCAAGCCCCGGTTTTGCCAGAATTAATGAGTCCCCAGGCCCCTCTTCATCGAAAACTAGACCGAGTATCAAGACTCTACTCCCCAAACTCAGCTTGAAGATCCGGAACACAAGCTCACAGATTGAAAAGGCTGCATTCTTAGCACTTGAAGGCTCGCCGAAAGTGACACCGAAAAAGCCTCTTCTTCTAAGGACATTATCGCTTACAAAGTTGATCACACCTAGAGGGAAGAACACGGCATCGTTGCCTGTGACGCCGATTGCTCATTCAAATCCAGAGTCTACACATGGAGGGAATGCAGCATATCTAGCTACACCACCTACTGACAAAGGAATCCAAATACCGATTCATCGATCCCGTTCAGTTCCAACACTTAACAAAGAAGGGAACACACCTATAGGTGGCATGTTTCGTGTAATTCCGGCCACTCCAAGATTGGATGAGAAAACTGCTGCAGCAGCATCTGTGACATCTCCACCTCATGATACTGTTGAACATGAGGATGGAGGTGAAGATATTCCTGAAGAAGAAGCTGTTTGTAGAATTTGTATGATTGAATTGGGAGAAGGTGCTGATACTCTCAAATTCGAGTGCAGCTGCAAAGGTGAACTTTCACTGGCACACCAAGAATGTGCAGTCAAATGGTTCAGCATCAAAGGGAACAGAACATGTGATGTGTGCAAGCAAGAAGTCAAGAACCTTCCTGTCACTCTTCTACGCGTCCAAACCGCGCGCGCAAACGGCTTTAGAGGCCAAGCTGATATTTCTCAACCCAGGGTTTGGCAGGATGCTCCTATTCTTGTTATTGTCAACATGCTTGCTTACTTTTGTTTTCTTGAGCAGCTTCTTGTTTCAAACATGGGATCTGGTGCAGTTGCTATGTCTCTCCCATTTTCCTGTATACTAGGTCTTCTTGCTAGCATGACATCAACAACAATGGTGAGGAGAAATCATGTTTGGGTTTATGCAACTGTGCAGTTTGGTCTAGTGGTTCTTGCAGGACATATTTACTACTCATTGATTCATATGCAAGCTGTTCTAGCTATATTGCTTGCTACATTTACTGGTTTTGGGGCTGTAATGTTTGGAGCCTCTATTCTTTCTGAGATTCACAACTGGAGGAGAAGAACAGTTTCTCAGTTGAATCAACAACATGGTTCTGAAGTGGCAGTACCACCTGATCAATCACCTGCACCTGCTCATCAATCTCATCAGCCTGATTCTCAATATCCTCAAGCTAATTCAAGAGACTCTCCTCTGAATGTGAGCTAA 1527 0.4401 MMQTEAATEGNHSKDNCEKRADTPIQKGLDSSEITEELPSGQHGTRKNLILEIPTTSILEEAREDFLRIDMPLTPPPRRVNFSPCPSPGFARINESPGPSSSKTRPSIKTLLPKLSLKIRNTSSQIEKAAFLALEGSPKVTPKKPLLLRTLSLTKLITPRGKNTASLPVTPIAHSNPESTHGGNAAYLATPPTDKGIQIPIHRSRSVPTLNKEGNTPIGGMFRVIPATPRLDEKTAAAASVTSPPHDTVEHEDGGEDIPEEEAVCRICMIELGEGADTLKFECSCKGELSLAHQECAVKWFSIKGNRTCDVCKQEVKNLPVTLLRVQTARANGFRGQADISQPRVWQDAPILVIVNMLAYFCFLEQLLVSNMGSGAVAMSLPFSCILGLLASMTSTTMVRRNHVWVYATVQFGLVVLAGHIYYSLIHMQAVLAILLATFTGFGAVMFGASILSEIHNWRRRTVSQLNQQHGSEVAVPPDQSPAPAHQSHQPDSQYPQANSRDSPLNVS* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g2315 508 Pfam RING-variant domain 265 312 IPR011016 GO:0008270
Aev02g2315 508 ProSiteProfiles Zinc finger RING-CH-type profile. 257 319 IPR011016 GO:0008270
Aev02g2315 508 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 252 321 IPR013083 -
Aev02g2315 508 CDD RING_CH-C4HC3_MARCH 265 313 - -
Aev02g2315 508 MobiDBLite consensus disorder prediction 28 42 - -
Aev02g2315 508 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 7 494 - -
Aev02g2315 508 MobiDBLite consensus disorder prediction 483 508 - -
Aev02g2315 508 SMART ringv_2 264 313 IPR011016 GO:0008270
Aev02g2315 508 MobiDBLite consensus disorder prediction 469 508 - -
Aev02g2315 508 MobiDBLite consensus disorder prediction 11 26 - -
Aev02g2315 508 PANTHER OS02G0165000 PROTEIN 7 494 - -
Aev02g2315 508 MobiDBLite consensus disorder prediction 1 49 - -
Aev02g2315 508 SUPERFAMILY RING/U-box 261 316 - -
Aev02g2315 508 MobiDBLite consensus disorder prediction 237 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g2315 Aev-Chr2 23982879 23985651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g2315 262 364 C3H Transcription Factor Family AT2G37950 31.304 1.38e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g2315 - - gmx:100787963 686.797