Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g2313 ATGCAAATGATTCCCGGTGACCCTTTTTCTTTATCACCATCCACTAATAATTCCTCCATTGGAGGCTTTGCTCATCATCATCTTCAACAAGACCATAACACAAACCCTAACCCTAAACTAAATAATGATCCACCTCCTCCTCCTCTTCAACCCCCCAAAAAAAAGAGAAACTTGCCAGGAACACCAGATCCAGATGCTGAGGTCATTGCTCTATCTCCCAAGACTCTTATGGCAACAAACAGGTTCATATGTGAGATATGCAACAAAGGGTTCCAAAGGGACCAAAACCTTCAGCTTCACAGGAGAGGCCACAACCTCCCCTGGAAGCTGAGGCAAAGGTCCAACAAGGAGGTGAGAAAGAAGGTGTACATATGTCCGGAAAAGACATGCGTACACCACGACCCCTCGAGGGCACTGGGAGACCTCACCGGCATCAAGAAGCACTTCAGCAGGAAGCACGGCGAGAAGAAGTGGAAGTGTGACAAGTGCTCCAAGAAATATGCTGTCCAATCTGATTGGAAAGCTCACACCAAGACTTGTGGTACTAGAGAATACAAGTGTGACTGCGGCACCCTCTTCTCCAGGAAGGACAGCTTCATTACCCACAGAGCATTCTGTGATGCATTGGCAGAAGAGAGTGCAAGGTTCACATCAGTGAACAGCACAGCAAATATTGTTAACATGAAGAATGAAGATAGTTCTGTTCTTGTGATGAACAGCAACAATAATGTAGTAGCACATGGCCTAATTGCCTCTTCTGGGGAGCAGGGGATTCTTCTTCATCATCATCACCATCAAAATAATAATAATAATAATAATAATAATAATAATGTATTAGGTGCTTCAGCAGCAATGATCCCTCCTCATCAATTTGGTCTTGACTTCAGTGGAATGGATCAGAATAGACCAAGCTTGTCACTATGGTTGAGCCAAGCAGGGAATAATAACTCTGCCCTCTATAATGTGCCCTCTTCATCAGTAGGTTTGCCTGATATTGTGCAGCAAATGTCACAACAACACCAAGTTTCTACTAATAACAACAATGATAATAATAACAGCAACAGTGGTTCCTTAATTGGCTCAAATAATTCAGTATTATTGTCCAATTATGGAATCCCTCCTCCTCCCAATTCAAATACTAATAATAGTGCAAGTAGCAGCCTTTCACTATCTTCACTACCAATTGGGAAAAGAGGAGCAGAGTTATTATTAGGGGCAAGTGGAAACTCTTCACCATCATCAGATCATCATCACAATAACTTGCCATCTTCTTCTTCTATTTATAACAGCAGTAGTTGTGAGGGTCAGAGCAATAAGCAACTATTATTGTTATCATCATCATCAAATTCTTCAGCAACACCAATGTCAGCCACTGCTCTTCTTCAGAAAGCAGCTCAGATGGGTTCCACAAGATCATCAAGCAACAATAACACAGCAGCATCAATTTTCAGTGCTAGTTTTGGTGTGATGGCCTCATCTTCAAGTAATAATAATAGTAATGCCAATTTCAGCTCATCAAACAGTTTTGATCAGATTGTGATGCATCAAAGTAGTGAGGTGGTGAATAATAAAAGTAAGTTGAAGGTCCATCATCATCATGGTGCTGTGGAACAACAGAAGAATCTGACAAGGGATTTTCTTGGAGTGAGCGGTGGGCATGGAGGGGGTGCTCCTCAATTTCTTCCGCAAGACCTTGCAAACTTTGCTTCCATTGCCTCACCAATGGGGTTAACCCAATTCGCAACCAATCAGTAG 1755 0.4234 MQMIPGDPFSLSPSTNNSSIGGFAHHHLQQDHNTNPNPKLNNDPPPPPLQPPKKKRNLPGTPDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVRKKVYICPEKTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHTKTCGTREYKCDCGTLFSRKDSFITHRAFCDALAEESARFTSVNSTANIVNMKNEDSSVLVMNSNNNVVAHGLIASSGEQGILLHHHHHQNNNNNNNNNNNVLGASAAMIPPHQFGLDFSGMDQNRPSLSLWLSQAGNNNSALYNVPSSSVGLPDIVQQMSQQHQVSTNNNNDNNNSNSGSLIGSNNSVLLSNYGIPPPPNSNTNNSASSSLSLSSLPIGKRGAELLLGASGNSSPSSDHHHNNLPSSSSIYNSSSCEGQSNKQLLLLSSSSNSSATPMSATALLQKAAQMGSTRSSSNNNTAASIFSASFGVMASSSSNNNSNANFSSSNSFDQIVMHQSSEVVNNKSKLKVHHHHGAVEQQKNLTRDFLGVSGGHGGGAPQFLPQDLANFASIASPMGLTQFATNQ* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g2313 584 MobiDBLite consensus disorder prediction 406 432 - -
Aev02g2313 584 MobiDBLite consensus disorder prediction 39 57 - -
Aev02g2313 584 Pfam Zinc-finger double-stranded RNA-binding 82 104 IPR022755 -
Aev02g2313 584 MobiDBLite consensus disorder prediction 403 432 - -
Aev02g2313 584 SUPERFAMILY beta-beta-alpha zinc fingers 81 178 IPR036236 -
Aev02g2313 584 MobiDBLite consensus disorder prediction 7 38 - -
Aev02g2313 584 ProSiteProfiles Zinc finger C2H2 type domain profile. 82 104 IPR013087 -
Aev02g2313 584 PANTHER ZINC FINGER PROTEIN JACKDAW 18 572 IPR033243 GO:0003700
Aev02g2313 584 Gene3D Classic Zinc Finger 60 131 - -
Aev02g2313 584 Gene3D Classic Zinc Finger 132 215 - -
Aev02g2313 584 ProSitePatterns Zinc finger C2H2 type domain signature. 84 104 IPR013087 -
Aev02g2313 584 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 18 572 - -
Aev02g2313 584 MobiDBLite consensus disorder prediction 335 390 - -
Aev02g2313 584 MobiDBLite consensus disorder prediction 1 66 - -
Aev02g2313 584 SMART c2h2final6 123 153 IPR013087 -
Aev02g2313 584 SMART c2h2final6 158 178 IPR013087 -
Aev02g2313 584 SMART c2h2final6 82 104 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g2313 Aev-Chr2 23973138 23975584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g2313 1 250 IDZ Gene Family AT5G03150 70.992 1.39e-121 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev02g2313 zf-C2H2_jaz 8.8e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g2313 K25870 - gmx:100801182 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0246 06 1833593 1835281 Aev02g2313 02 23973138 23975584 PCT