Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g2304 ATGATTACATTTATGGATTCAAAGGAGAAAACAAGAGATGTTGGGGAGAAGTTTTTGGACCCTCAGCTATGGCATGCTTGTGCTGGTGGAATGGTGCAGATGCCACAGGTTAACACAAAGGTCTATTACTTCCCTCAGGGCCATGCTGAGCATGCATGTGGTCCTGTGAACTTTAGGACCTGCCCTAAGATTCCACCTATGGTTCCTTGTAGGGTAGGTGCTGTCAAGTACATGGCTGATCCTGAGACTGATGAGGTCTATGCCAAAATTAGGCTTGTTCCTCTTAGTGGCAGTGATTCTGATTATGAAAATGGTGTTGCTGGAGGCATCAATAATGATCCTGAACCTCAGGATAAGCCTGCTTCATTTGCAAAGACCTTGACACAATCTGATGCCAACAATGGTGGTGGTTTCTCTGTTCCCAGATACTGTGCAGAGACGATTTTCCCTCGGTTGGACTATACGGCTGACCCTCCTGTCCAGAACATCCTTGCCAAGGATGTCCATGGCGAGACGTGGAAGTTCAGGCACATTTACAGGGGCACGCCGAGGCGGCACCTGTTGACCACTGGTTGGAGTACTTTTGTCAATCACAAGAAGCTTCTTGCTGGGGACTCGATTGTGTTCTTAAGGGCAGAAAATGGGGATCTGTGTGTTGGAATTCGGCGGGCGAAGAAGGGTCTTGGTGGTGGGGCTGAGGCTTCTTCAGGCTGGAATCCTGCAGGTGGGAATTGTCCTGTGCCTTATGGTGGATTTCCGGGTTTTCTGAAGGAGGATGATATCAGACTCCTGAGAAATAGTAATGGCAATGGCAATGGATTGGATCCGAGTACAAGAATGATGGGAAGGGGAAAAGTGAGGCCGGAAGCAGTGACCGAAGCCGCTACTCTTGCTGCCAATAAGCAACCTTTTGAGGTTGTTTACTACCCTCGCGCAAGTACACCGGAGTTCTGTGTGAAGGCCTCATTGGTTGAAGCAGCGCTGCAGATTAGGTGGTGCTCTGGAATAAGGTTCAAGATGGCCTTTGAAACCGAGGACTCATCGCGGATCAGTTGGTTCATGGGGACCATATCTTCAGTTCAGGTTGCTGATCCCCTTGGCTGGCCTAACTCACCTTGGAGGCTTCTCCAGGTTACATGGGATGAACCGGATTTACTCCAAAACGTAAGAAGGGTGAGTCCATGGCTTGTTGAATTGGTATCAAACATGCCTGCCCTCCATCTTTCCCCTTTCTCACCACCGCGGAAGAAACTGAGATTGCCCTTACACCCAGATTTTCCCCTTGATGGCCACATTCCGATGCCAACATTTCCCAGCCATCTTCTAGGTCCGAGTAACCCATACGGTTGTCTACCCGAAAGTACTCCTGCTGGCATGCAGGGAGCCAGGCATGCTCATTACGGTCTATCCTTATCGGACCTCCACCTCAGTAAACTTCAGTCAGGTCTATATCCGGCCGGTTTCCGACCTCTTGATCACGCTGCTTCACCAATGAGGATCTCAAATAACTTAATATTGCAAAAGCCCAGCACGAGTGAGAATGTCTCTTGTCTACTATCTATGGCAAGTTCTCCCCAGTCTTTGAGAAAACCATATGATGTGAAGACACAACCACAGCTTGTGCTTTTCGGCCAAAAAATTCTCACGGAGCAGCAGCTCTCACAGAGCAGCTCTGGTGACACAGTCTCCCTGGTTCTTACCGGAAACAGTTCCTCAGATGGAAATGCTGATAAAGTGACTAATTTTTCTGATGGTTCTGGATCTGCTCTTCATCAACGAGGCCAACCGGAACGCTCATCTTGTGAGAGGTTCCAATGGTACAGGGATCACCGCCAAGAAACCGAGGCTGGTTTGGAGACTGGTCACTGTAAAGTTTTCATGGAATCAGAAGACGTAGGTCGGACTCTGGACCTCTCGTTGCTTGGTTCTTACGATGAACTGTACAGAAAGCTGGCAGAGATGTTCGGCATTGAAAAATCTGATATGCTAAGCCATATGCTCTACCGCGATATAACCGGGGCAGTTAAACACATTGGAGAAGAACCATTCAGTGATTTCGCGAGAACGGCGAGGAGGTTGACTATTCTAACGGATTCCAGCAGTGACAATGTAGGAGTGTAG 2121 0.4875 MITFMDSKEKTRDVGEKFLDPQLWHACAGGMVQMPQVNTKVYYFPQGHAEHACGPVNFRTCPKIPPMVPCRVGAVKYMADPETDEVYAKIRLVPLSGSDSDYENGVAGGINNDPEPQDKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLLAGDSIVFLRAENGDLCVGIRRAKKGLGGGAEASSGWNPAGGNCPVPYGGFPGFLKEDDIRLLRNSNGNGNGLDPSTRMMGRGKVRPEAVTEAATLAANKQPFEVVYYPRASTPEFCVKASLVEAALQIRWCSGIRFKMAFETEDSSRISWFMGTISSVQVADPLGWPNSPWRLLQVTWDEPDLLQNVRRVSPWLVELVSNMPALHLSPFSPPRKKLRLPLHPDFPLDGHIPMPTFPSHLLGPSNPYGCLPESTPAGMQGARHAHYGLSLSDLHLSKLQSGLYPAGFRPLDHAASPMRISNNLILQKPSTSENVSCLLSMASSPQSLRKPYDVKTQPQLVLFGQKILTEQQLSQSSSGDTVSLVLTGNSSSDGNADKVTNFSDGSGSALHQRGQPERSSCERFQWYRDHRQETEAGLETGHCKVFMESEDVGRTLDLSLLGSYDELYRKLAEMFGIEKSDMLSHMLYRDITGAVKHIGEEPFSDFARTARRLTILTDSSSDNVGV* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g2304 706 Pfam Auxin response factor 294 377 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aev02g2304 706 Gene3D - 331 405 - -
Aev02g2304 706 Gene3D - 121 225 IPR015300 -
Aev02g2304 706 SUPERFAMILY DNA-binding pseudobarrel domain 117 224 IPR015300 -
Aev02g2304 706 ProSiteProfiles PB1 domain profile. 620 700 IPR000270 GO:0005515
Aev02g2304 706 MobiDBLite consensus disorder prediction 575 595 - -
Aev02g2304 706 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 6 697 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aev02g2304 706 PANTHER AUXIN RESPONSE FACTOR 6 697 - -
Aev02g2304 706 Gene3D - 618 704 - -
Aev02g2304 706 SMART B3_2 123 225 IPR003340 GO:0003677
Aev02g2304 706 MobiDBLite consensus disorder prediction 575 597 - -
Aev02g2304 706 CDD B3_DNA 122 223 IPR003340 GO:0003677
Aev02g2304 706 ProSiteProfiles B3 DNA-binding domain profile. 123 225 IPR003340 GO:0003677
Aev02g2304 706 Pfam B3 DNA binding domain 123 224 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g2304 Aev-Chr2 23916605 23919136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g2304 16 706 B3 DNA Binding Superfamily AT4G30080 57.835 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Aev02g2304 B3 7.4e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g2304 - - gmx:100796522 1168.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g2304 02 23916605 23919136 Aev09g1995 09 23327013 23329635 ECH
Aev02g2304 02 23916605 23919136 Aev02g2304 02 23916605 23919136 ECH
Aev02g2304 02 23916605 23919136 Aev10g1916 10 20616539 20619154 ECH
Aev02g2304 02 23916605 23919136 Aev04g3000 04 29798323 29801519 ECH