Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g2232 ATGTCGGAATCCGCCGCCGCCTCCACCACCGACGCCGCTCCTCCGCCGGCACCTCACAAGAGCTGGGCTGACGAAGCTGACGACGACGACGACGCCGCCGCAGACGAAACCACAACAACGGCGCCGCCACCATCTTCGAGCTCTTCCGAAGCAACCGCAGCATCGTCTCTCAAAGTCGACGAATTGTCGATCGACGAAACCAAGAAGCCTCCGAAGCTGTTGGACGATCCCGACGACTCCAATATCCAAGCGGTTACCTCTGGCGACACGCCATACACCTCTGCATCGAGATTCGAGGACCTGAACCTCTCGCAGGAGCTGCTGAAGGGTCTCTATGTGGAGATGAAGTTCCAGAAGCCGAGCAAGATCCAAGCTATAAGCTTGCCGATGATCCTGAGCCCACCACATCGGGATTTGATAGCACAGGCGCACAATGGTTCGGGCAAGACCACATGCTTTGTTCTAGGGATGCTTAGCCGAGTGGATCCGTCTATGCAGGCTCCTCAAGCGCTCTGCATTTGCCCAACAAGGGAGCTGGCTATTCAGAACACTGAAGTTCTCCGGAAGATGGGGAAGTACACAGGGATTAGCTCAGAGTGTGCTGTTCCAACAGACCGCAGGGACTCGATTCCGATAGGAAAAAGGCCACCAATTATGGCTCAGGTGGTTATTGGGACCCCTGGCACTATAAAAAAGTGGATGACTTACAAGAAACTGGGTGTGACCAGATTGAAGATTCTTGTTTTTGATGAAGCTGATCAAATGCTTGCTGAGGATGGTTTTAAAGATGATTCCTTGAGGATAATGAAGGAAATAGAAAAAGTCAATTCTAGCTGTCAGGTTCTTCTGTTTTCTGCTACATTCAATGAAATTGTCAAGAACTTTGTATCAAGGACAATTAAGCAGGATCATAATAAACTTTTTGTGAAAAAAGAAGAACTTTCTTTAGATGCTGTGAAGCAATATAAAGTGAGTTGTCCTGATGAGCTGTCTAAGATTGAAGTGATAAAAGATTACATATTTGAAATCGGAGAGAATGTGGGCCAAACTATTATATTTGTGCGCACAAGAAATAGTGCAAAAATGCTGCATAAATCACTTGTCGATATGGGTTATGAGGTTACTTCCATTCAAGGTGATCTTGAGCATGAAGAGAGAGACAAGATTGTCAAGGAGTTTAAAGATGGTTTGACACAAGTTCTTATATCAACTGATGTTCTTGCTCGAGGCTTTGATCAGCAACAGGTTAATTTGGTTATAAACTATGATCTTCCAGTGAAACGTATGGCTGAATATTCCCGTGACCGTGAATTTGAGCCTGATTATGAGGTCTATTTGCACAGAGTGGGTAGGGCTGGACGTTTCGGGCGCAAGGGGGCTGTATTCAACCTGATATGTTCTAAAGATGATGAAAAGTTGATGTCAAAGATTGAGAATCATTTCGGCACCCATGTAACAGAGGTGCGAGAAAAAAGTGTTGAAGACTATAAAAATGCTCTTAAGCAAGCTGGGTTACTATAA 1521 0.4583 MSESAAASTTDAAPPPAPHKSWADEADDDDDAAADETTTTAPPPSSSSSEATAASSLKVDELSIDETKKPPKLLDDPDDSNIQAVTSGDTPYTSASRFEDLNLSQELLKGLYVEMKFQKPSKIQAISLPMILSPPHRDLIAQAHNGSGKTTCFVLGMLSRVDPSMQAPQALCICPTRELAIQNTEVLRKMGKYTGISSECAVPTDRRDSIPIGKRPPIMAQVVIGTPGTIKKWMTYKKLGVTRLKILVFDEADQMLAEDGFKDDSLRIMKEIEKVNSSCQVLLFSATFNEIVKNFVSRTIKQDHNKLFVKKEELSLDAVKQYKVSCPDELSKIEVIKDYIFEIGENVGQTIIFVRTRNSAKMLHKSLVDMGYEVTSIQGDLEHEERDKIVKEFKDGLTQVLISTDVLARGFDQQQVNLVINYDLPVKRMAEYSRDREFEPDYEVYLHRVGRAGRFGRKGAVFNLICSKDDEKLMSKIENHFGTHVTEVREKSVEDYKNALKQAGLL* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g2232 506 Gene3D - 75 312 IPR027417 -
Aev02g2232 506 PANTHER DEAD-BOX HELICASE DBP80 75 486 - -
Aev02g2232 506 MobiDBLite consensus disorder prediction 38 56 - -
Aev02g2232 506 MobiDBLite consensus disorder prediction 61 76 - -
Aev02g2232 506 SMART ultradead3 116 322 IPR014001 -
Aev02g2232 506 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 335 497 IPR001650 -
Aev02g2232 506 Pfam DEAD/DEAH box helicase 122 294 IPR011545 GO:0003676|GO:0005524
Aev02g2232 506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 474 IPR027417 -
Aev02g2232 506 Gene3D - 313 504 IPR027417 -
Aev02g2232 506 CDD SF2_C_DEAD 319 465 - -
Aev02g2232 506 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 130 306 IPR014001 -
Aev02g2232 506 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 96 125 IPR014014 GO:0003724
Aev02g2232 506 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 75 486 - -
Aev02g2232 506 MobiDBLite consensus disorder prediction 1 93 - -
Aev02g2232 506 CDD DEADc_DDX19_DDX25 103 302 - -
Aev02g2232 506 Pfam Helicase conserved C-terminal domain 332 456 IPR001650 -
Aev02g2232 506 SMART helicmild6 361 456 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g2232 Aev-Chr2 23389410 23392910 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g2232 62 488 Eukaryotic Initiation Factors Gene Family AT1G72730 35.092 8.97e-71 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g2232 K18655 - gmx:100784739 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g2232 02 23389410 23392910 Aev02g2232 02 23389410 23392910 ECH