Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g2221 ATGGTTCTCAAGACCGAGCTTTGCCGTTTCAGTGGGGCGAAGATCTACCCTGGGAAAGGAATCAGATTCATCCGTGGCGATTCTCAGGTCTTTCTGTTCGCCAACTCGAAATGCAAGAGGTACTTCCACAACAGATTGAAGCCTTCAAAGCTCACATGGACTGCCATGTATAGGAAGCAACACAAGAAGGATATTTCCCAAGAAGCCGTGAAGAAGAAGCGCCGTGCCACCAAGAGGCCTTACTCTAGGTCCATTGTTGGTGCCACATTGGAAGTTATTCAGAAAAGAAGAACTGAGAAGCCAGAGGTTCGAGATGCTGCCAGAGAAGCTGCTCTTCGTGAAATCAAAGAAAGGATCAAGAAGACGAAGGACGAGAAGAAGGCAAAGAAGGCAGAAGTCATGTCCAAGGCCCAGAAAACACAAGGCAAAACCAATACTGCCAAGGGCGCACAACCGAAAGGTCCTAAGCTTGGCGGTGGCGGAGGAAAGCGTTGA 495 0.4909 MVLKTELCRFSGAKIYPGKGIRFIRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDISQEAVKKKRRATKRPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVMSKAQKTQGKTNTAKGAQPKGPKLGGGGGKR* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g2221 164 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Aev02g2221 164 Coils Coil 112 132 - -
Aev02g2221 164 PANTHER 60S RIBOSOMAL PROTEIN L24 1 164 IPR000988 -
Aev02g2221 164 MobiDBLite consensus disorder prediction 119 164 - -
Aev02g2221 164 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Aev02g2221 164 SMART 4TRASH 8 46 IPR011017 -
Aev02g2221 164 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Aev02g2221 164 Gene3D - 66 129 - -
Aev02g2221 164 MobiDBLite consensus disorder prediction 119 136 - -
Aev02g2221 164 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Aev02g2221 164 PANTHER LOW QUALITY PROTEIN: 60S RIBOSOMAL PROTEIN L24-LIKE 1 164 - -
Aev02g2221 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g2221 Aev-Chr2 23297642 23300504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g2221 1 157 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 82.803 1.69e-84 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g2221 K02896 - vvi:100245887 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g2221 02 23297642 23300504 Aev02g2221 02 23297642 23300504 ECH
Aev06g0335 06 2450751 2452471 Aev02g2221 02 23297642 23300504 PCT