Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g2220 ATGGATTGGAATAATGGGAGCACAAGACCCTCCTTTGTTCCTCATCGAGCAGAGTCTTCTTCATTGAGCTTCCTCTACAACTATAACTACACTCCATATCCAGGAATCGAAGTGAAGCAACAAGCTTCATTGGTGGAGACATCTCCACCATCATTATCATCATCAATGGAGAAAATGATGATGAGCAGTGGCGGTGGCGGTGGATCCCATAACAACTCGGATAAAAAGAAGAGGCTAACGAGTGAGCAACTAGACTCACTCGAAAGAAGCTTCCAGAAGGAGATAAAGCTGGATCCAGACAGGAAGATGAGGCTCTCAAGGGAGTTAGGGTTACAACCTCGACAGATTGCTGTTTGGTTCCAAAATAGGCGAGCAAGGTGGAAGGCTAAGCAGCTTGAGAACTTGTATGATTCACTTAAGCAAGAATTTGATGTCATTTCCAAGGAAAAACAGAGGCTCCAAGAAGAGGTGATGAAGTTGAAGAGTATGCTGAGAGAACAAGCTTCAAGGACACAGATATCAGCAGGGTACACAGAAATCTCTGGTGGGGAAGAAACTGTTGAGAGCACTTCAGAGGCTCTCCGATGTTCCAACAAGCACCAAAGGGAAACATCACTTAATATTGTTCCTCATAATCATAATCAGCACCAACAACATAGTAATGTGGTTGAAGGAAATTGCTCTTTCACTGTGGAAAACTACAACAACCCTGTTCCTGTGTTGCCTTATTGGCCTGGTGTTCCATATTACCCTTAG 756 0.4392 MDWNNGSTRPSFVPHRAESSSLSFLYNYNYTPYPGIEVKQQASLVETSPPSLSSSMEKMMMSSGGGGGSHNNSDKKKRLTSEQLDSLERSFQKEIKLDPDRKMRLSRELGLQPRQIAVWFQNRRARWKAKQLENLYDSLKQEFDVISKEKQRLQEEVMKLKSMLREQASRTQISAGYTEISGGEETVESTSEALRCSNKHQRETSLNIVPHNHNQHQQHSNVVEGNCSFTVENYNNPVPVLPYWPGVPYYP* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g2220 251 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 1 242 - -
Aev02g2220 251 SUPERFAMILY Homeodomain-like 51 132 IPR009057 -
Aev02g2220 251 CDD homeodomain 75 131 IPR001356 GO:0003677
Aev02g2220 251 Gene3D - 68 138 - -
Aev02g2220 251 Pfam Homeodomain 75 128 IPR001356 GO:0003677
Aev02g2220 251 SMART HOX_1 73 134 IPR001356 GO:0003677
Aev02g2220 251 MobiDBLite consensus disorder prediction 42 85 - -
Aev02g2220 251 MobiDBLite consensus disorder prediction 71 85 - -
Aev02g2220 251 MobiDBLite consensus disorder prediction 42 70 - -
Aev02g2220 251 PRINTS Lambda-repressor HTH signature 110 126 IPR000047 GO:0003677
Aev02g2220 251 PRINTS Lambda-repressor HTH signature 101 110 IPR000047 GO:0003677
Aev02g2220 251 Coils Coil 122 170 - -
Aev02g2220 251 ProSiteProfiles 'Homeobox' domain profile. 70 130 IPR001356 GO:0003677
Aev02g2220 251 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 242 IPR045224 GO:0003700
Aev02g2220 251 ProSitePatterns 'Homeobox' domain signature. 105 128 IPR017970 GO:0000981|GO:0006355
Aev02g2220 251 Pfam Homeobox associated leucine zipper 130 164 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g2220 Aev-Chr2 23285235 23287517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g2220 1 160 Homeobox Transcription Factor Family AT5G03790 53.939 1.45e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev02g2220 Homeodomain 3.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g2220 - - gmx:100778007 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g2220 02 23285235 23287517 Aev06g0336 06 2453373 2454575 PCT