Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g2207 ATGAACCCAAATGATGAACCAAAAGGTAAAGCTAAGGCACATGAAAAACCCTCTTCTTCTTCTTCTGCTCAGATGGTGGAGCATATGACAACAGGATTCTCTCCCATGGAATTCTGTTCTCAACCATTCTCATCAGCTTTTGATGATTCTTTTGATGTTATTGATGATATTGATACCTCTTTCATGGATTTTGAAGCATTCTCTGAAGCTATGATTCAACCACCACCAATAACAACAACAACCTCCATCACAGTGCCTCAGCCATTGGAGAGCTTGCAAGGGAGCCCTGTCCCACCATTTCTGAGCAAAACCTTTGACCTTGTTGATGACCCTTCTTTGGATCCTATCATCTCTTGGGGATCCAATGGTTCTAGCTTCGTGGTTTGGGACCCTATGGAGTTTTCAAGGATCGTCTTGCCAAGGAATTTCAAGCACAACAACTTCTCCAGTTTCGTTCGCCAGCTTAATACTTATGGATTCCGTAAGATTGACACGGACAAGTGGGAGTTTTTCAATGAAGCATTCCAGCGAGGGAAGAGGCATTTACTGAAGAACATACAAAGGCGAAGATCGGCTCAATCAGATGCAGGGAAACCTGGACTCGAGGTTGAGATAGAGAATCTGAAGAAGGAAAGGAGCATGCTGATGCAAGAGGTGGTTGATTTGCAGCAACAACAGCGAAGCACGGTTCGCCATGCCGGTGAAGTCAATCAGAGGCTTCAATCTGCAGAGCAAAGGCAGAAACAAATGGTTTCCTTCTTGGCCAAGTTATTTCAGAACCCTGCATTCTTGACTCGTCTCAGGCAGAAGAAGGAACAAAGGCAAATAGGGTCTCCAAGATTGAAAAGGAAGTTTGCTAAGCAGCACCAAGATGAAGCAGGAACATCAGAAACTCCCAAGGAAGGGATGATAGTGAGGTACCAACCCGAATGGAGAAGTATAACAGTCTCTTCCGAAAATCCTGAACTAAATCCTGTTTCCATTGAACATTCTCCTCACTATCTTTCACAGGATTTCTCTAGAGAAATGAGTTTAGCACACGAGGCTATGCCAAATCCAGGAGTCATTGGAGAAGGATCATCAAGCTTTGGACTTGAAGATTCCCTTTTGAAAGGGAAAAACATCTTGAGCGAACCGAATCAAGATGTTCTTCCAGAGTATCTTGCTTCCTTCCCAGAGGATTTGTCTAAGGAAAGAGGCTTTCCAGTGTTCTCCCCTCTTCGAACCGAAAGCATTATCAAGCAAGAAGATATATGGGAGCCTGAATTCAATGTTAGTGGTGTTTCTGCCGCTGCTACAAGCTGTGGGAGTGATATTTGGGGTTATCCAATAAACTATGAAGTGCCAGAATTTGGAGGAACAAGTGGTGTATCAGATATATGGGATATTGGCTCAGGAAGCTTGAGTATTGATAAATGGCCAGTTGATGAACCTCCCCTTGATGAAGAGGAGGGACAAAATGGTCAACAACAAAAAGATGATAGAACTTGA 1491 0.4359 MNPNDEPKGKAKAHEKPSSSSSAQMVEHMTTGFSPMEFCSQPFSSAFDDSFDVIDDIDTSFMDFEAFSEAMIQPPPITTTTSITVPQPLESLQGSPVPPFLSKTFDLVDDPSLDPIISWGSNGSSFVVWDPMEFSRIVLPRNFKHNNFSSFVRQLNTYGFRKIDTDKWEFFNEAFQRGKRHLLKNIQRRRSAQSDAGKPGLEVEIENLKKERSMLMQEVVDLQQQQRSTVRHAGEVNQRLQSAEQRQKQMVSFLAKLFQNPAFLTRLRQKKEQRQIGSPRLKRKFAKQHQDEAGTSETPKEGMIVRYQPEWRSITVSSENPELNPVSIEHSPHYLSQDFSREMSLAHEAMPNPGVIGEGSSSFGLEDSLLKGKNILSEPNQDVLPEYLASFPEDLSKERGFPVFSPLRTESIIKQEDIWEPEFNVSGVSAAATSCGSDIWGYPINYEVPEFGGTSGVSDIWDIGSGSLSIDKWPVDEPPLDEEEGQNGQQQKDDRT* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g2207 496 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 85 492 IPR027725 -
Aev02g2207 496 MobiDBLite consensus disorder prediction 1 15 - -
Aev02g2207 496 PRINTS Heat shock factor (HSF) domain signature 100 123 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev02g2207 496 PRINTS Heat shock factor (HSF) domain signature 138 150 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev02g2207 496 PRINTS Heat shock factor (HSF) domain signature 151 163 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev02g2207 496 SMART hsfneu3 96 189 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev02g2207 496 ProSitePatterns HSF-type DNA-binding domain signature. 139 163 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev02g2207 496 SUPERFAMILY "Winged helix" DNA-binding domain 95 189 IPR036390 -
Aev02g2207 496 Coils Coil 198 225 - -
Aev02g2207 496 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-3 85 492 - -
Aev02g2207 496 Pfam HSF-type DNA-binding 100 189 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev02g2207 496 MobiDBLite consensus disorder prediction 1 26 - -
Aev02g2207 496 MobiDBLite consensus disorder prediction 269 296 - -
Aev02g2207 496 MobiDBLite consensus disorder prediction 469 496 - -
Aev02g2207 496 Gene3D - 93 190 IPR036388 -
Aev02g2207 496 MobiDBLite consensus disorder prediction 269 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g2207 Aev-Chr2 23176369 23179180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g2207 85 452 HSF AT5G03720 48.187 4.45e-102 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Aev02g2207 HSF_DNA-bind 7.8e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g2207 K09419 - gmx:100780835 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g2207 02 23176369 23179180 Aev02g2207 02 23176369 23179180 ECH