Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g2205 ATGGAGAGTTCACGTAGACCGTTCGATAGTAGATCGAGAGAACCGGGTCTCAAGAAGCCACGGTTGATGATGGAAGACCCTAACAATCCCAATTCGAGACCGTTCCCTCAGCGACAATTGGGTTCGGGGATTACGACGTTGTCGTCTACTAGGTTCAGGGCAACCGACAGAGACTCTGAAGGCTGTTATCAGCCGCAGCCACCGCCGGCGCAACAGCACCAGGAACTTGTGAATCAGTACAAGACAGCGCTTGCTGAGCTCACTTTCAATTCGAAACCGATCATTACCAATTTGACTATAATTGCAGGCGAGAACCAATCGGCGGCGAAGGCGATCGCCGCCACGGTTTGTGCTAACATTCTAGAGGTTCCTAGTGAACAAAAGCTGCCATCTCTTTATCTCCTAGACAGTATTGTTAAGAATATTGGGCGGGATTATATAAAGTATTTTGCTGCCAGACTACCTGAGGTTTTCATCAAGGCATACAGACAGGTTGAGCCTCCGGTCCATCAAAGTATGAGACATCTTTTTGGAACGTGGAAAGAAGTGTTTCCTCCTCAGACCCTTCAGATTATTGAGAAGGAACTAAATTTTACTCCACTGGTCAATGGTTCAGCTTCCGCATCTGCTACTCTCAGGAGTGATTCGCAGTCACAACGTCCACCTCATAGCATCCATGTGAATCCCAAGTATTTAGAAAGGCAGCGTCTTCAGCAGACCAGCAGGATTAAAGGAGTTGATGATATTACTGGAGCACTTGCAAACTCACATGAGGACCCAGAGAGGCCGGATAGAGCTTTGGGTGTTTCACGACCATGGGCAGATCCTAGTGTTAGTAATCATAGAGATGCATTCAATGATTCTTTCCTGGAAAAGAGTGTTAGTGCATCTTATGGAGGCAATGAATATGGTTCTGATCTATCAAGAAATTTGGGCTCAGGTACGGGCAGAGCTAGTGGTAGGGCCACTGATGTAGGACTTGACAAAAGTTGGTACAAAGCAGGAGGAGTTGCAGGAATGTTATCTGGGCAAAGAAATGGTTTCAGTGCAAAGAATAGTTTTTCAAATACTGAAGCACCGAAGTATCATCAGCCAACACAAAACATAAATAGCATACGGAGCAGTGTGGTATCTAGTAGCTGGAAAAATTCTGAGGAAGAGGAGTATACTTGGGATGAGATGAATTCCAGATTGACGGGTCATGGAGCACCAAATCCTTGGACTGCTAATGATGAGAATTTGGAAGTTGAAGATAATGTCCAAATCACAAATGCCTTTGGGGCAAATGTTGATAGAGAGATGGCCACTGAATCTCTAGGCACTGAAAAGAAACAATTTCCTGCATTTCGGCATCATTCATCTTTACCGTGGCAACTGCAGGATCAGCAATCACTTGATGAGATGAATAAGAAGTCAAGTCCCTCAGAAGGATATATGTCAACTATTGGTGGTTTGCCAGCCAATACACATTCCTCTGCCACCAGGATAGGGAATCGGCCTTTCTTATCAAATACAACAACAGGATTGGCAGGAATTGTGGGACAGCAACAATTTCACTCTGTTGGAGCTGAATCCCCCTCAGGGCAGTCGCCATTACGACAACAGTCTTCATCACCACCAGTAACTGTTCACCACCCTCAGATGAGAAATTTGGCCGAGCAAGATCGTCCTCAATCTCTTAAAACATCTCAGTTTCTGGAAGGTCTACAGAGCCAATATATTAAAGATTCCTCACCTGCCATTCCTCGTAATGTTCAGGCTGGTAACTTGCGAAGATCACAGCAAAAGGATTCACAGGGTCCATTCTCCTCAATGACTTCCTTTCAGCCAAGGCATCAGCAGCAGCTTGGCTTGTCTCACTCAGAAGTTACTCTTAAGGCTGAGAAGCCACCTGTGTCTAAAGTTTCTCTAGCCAGAGAAACTTCAGAAAAGTCAACCTCTAGTAGTTTGGAAGCTGCTACTGTGAAGAGTGGAATCTTCCCCAACTTGTCAACCACAACCAGTCTTCCCACAAGAAGTCGCCTGAATACAGGGAATCTTCCATCTCAATTAGGGGTTCGGCCTTCCCTGTCAAGTGGGCCTTCCTCAGTGCCCGCAATTGCAGCACCACCTTCGTTACCTTCTAATCAAAGAAAGGCTGAAAGAAAGGCTGGACAACTGCCAAGGGCAGCTACTCTACCACCAGCTTCATCTGATGTCAGCAGTGCCTCAGCCCAGACATCAAGTGCCACCAGCAATGCCTTAAATCCAATTGCAAACCTTTTAAGCTCATTAGTTGCAAAGGGTTTGATATCGACAGAATCAGAGTCACGAACTAAGGTGCCGTCTGAGATCCTGACTCGATTGGAAGATCAAAGAGAAAGCACTACCACTAGTAGCTCTTTGCCTGTTGCTTCAGCGTCTGGTTCTGCAGCTGTCCCATTACCTTCTGCCATAGATGATGTAGTTGATACTGCAAAATCACCTATATCCTTGTCTGAATCAACCAGCACAGAGATCAGAGACCTAATTGGCTTTGAGTTTAAGCCTGATGTAATCCGAGAATTGCACCCGTCTGTCATTAAAGCACTATTTGATGATCTTCCACATCCTTGTAGTGTATGTGACCTTGGGCTTAAGTTCCAAGAACAGCTTAATAGACACTTGGAGTGGCATGATACAAGAGAAAGAGAGAAAAATGATTGGACATCAAGACAATGGTTTCTGAAGTCAAGTGACTGGATCATTGGCAAGACTGAGTGTCTTTCCGAGTTTACTGAATCTGTAGATACATACAGCAAGGAAACCGAAAGGTGTCAAGAGGATGCAATGGTTCAAGCGGATGAAAACCAATGTTTGTGTGTTTTGTGTGGTGAGGTGTTTGAAGATTTCTACTCTCAGGAAAGTGGCGAGTGGATGTTCAAAGGGGCAGTTTACATGACTCACTTAGATAGCAATAGTGAAACGGGAATCGGAGATGCGAGTACTGCTACTGGTCCCATCATTCATGGAAGATGCTTATCAGAGAACCCAATATCAAGTGTCGTCAAAATGGAACAGGATTGA 3045 0.4516 MESSRRPFDSRSREPGLKKPRLMMEDPNNPNSRPFPQRQLGSGITTLSSTRFRATDRDSEGCYQPQPPPAQQHQELVNQYKTALAELTFNSKPIITNLTIIAGENQSAAKAIAATVCANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFIKAYRQVEPPVHQSMRHLFGTWKEVFPPQTLQIIEKELNFTPLVNGSASASATLRSDSQSQRPPHSIHVNPKYLERQRLQQTSRIKGVDDITGALANSHEDPERPDRALGVSRPWADPSVSNHRDAFNDSFLEKSVSASYGGNEYGSDLSRNLGSGTGRASGRATDVGLDKSWYKAGGVAGMLSGQRNGFSAKNSFSNTEAPKYHQPTQNINSIRSSVVSSSWKNSEEEEYTWDEMNSRLTGHGAPNPWTANDENLEVEDNVQITNAFGANVDREMATESLGTEKKQFPAFRHHSSLPWQLQDQQSLDEMNKKSSPSEGYMSTIGGLPANTHSSATRIGNRPFLSNTTTGLAGIVGQQQFHSVGAESPSGQSPLRQQSSSPPVTVHHPQMRNLAEQDRPQSLKTSQFLEGLQSQYIKDSSPAIPRNVQAGNLRRSQQKDSQGPFSSMTSFQPRHQQQLGLSHSEVTLKAEKPPVSKVSLARETSEKSTSSSLEAATVKSGIFPNLSTTTSLPTRSRLNTGNLPSQLGVRPSLSSGPSSVPAIAAPPSLPSNQRKAERKAGQLPRAATLPPASSDVSSASAQTSSATSNALNPIANLLSSLVAKGLISTESESRTKVPSEILTRLEDQRESTTTSSSLPVASASGSAAVPLPSAIDDVVDTAKSPISLSESTSTEIRDLIGFEFKPDVIRELHPSVIKALFDDLPHPCSVCDLGLKFQEQLNRHLEWHDTREREKNDWTSRQWFLKSSDWIIGKTECLSEFTESVDTYSKETERCQEDAMVQADENQCLCVLCGEVFEDFYSQESGEWMFKGAVYMTHLDSNSETGIGDASTATGPIIHGRCLSENPISSVVKMEQD* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g2205 1014 Gene3D - 68 197 IPR008942 -
Aev02g2205 1014 MobiDBLite consensus disorder prediction 1 47 - -
Aev02g2205 1014 MobiDBLite consensus disorder prediction 254 268 - -
Aev02g2205 1014 MobiDBLite consensus disorder prediction 30 47 - -
Aev02g2205 1014 SUPERFAMILY ENTH/VHS domain 72 196 IPR008942 -
Aev02g2205 1014 MobiDBLite consensus disorder prediction 785 800 - -
Aev02g2205 1014 MobiDBLite consensus disorder prediction 728 744 - -
Aev02g2205 1014 MobiDBLite consensus disorder prediction 253 273 - -
Aev02g2205 1014 ProSitePatterns Zinc finger C2H2 type domain signature. 865 885 IPR013087 -
Aev02g2205 1014 MobiDBLite consensus disorder prediction 209 229 - -
Aev02g2205 1014 Pfam CID domain 81 190 IPR006569 -
Aev02g2205 1014 MobiDBLite consensus disorder prediction 770 801 - -
Aev02g2205 1014 MobiDBLite consensus disorder prediction 209 224 - -
Aev02g2205 1014 SMART 558neu5 75 197 IPR006569 -
Aev02g2205 1014 MobiDBLite consensus disorder prediction 573 621 - -
Aev02g2205 1014 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 1 1011 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Aev02g2205 1014 MobiDBLite consensus disorder prediction 573 744 - -
Aev02g2205 1014 MobiDBLite consensus disorder prediction 1 21 - -
Aev02g2205 1014 MobiDBLite consensus disorder prediction 638 698 - -
Aev02g2205 1014 MobiDBLite consensus disorder prediction 520 544 - -
Aev02g2205 1014 ProSiteProfiles CID domain profile. 72 200 IPR006569 -
Aev02g2205 1014 PANTHER RNA POLYMERASE II-BINDING DOMAIN PROTEIN 1 1011 - -
Aev02g2205 1014 CDD CID_Pcf11 77 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g2205 Aev-Chr2 23165666 23171088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g2205 51 398 C2H2 Transcription Factor Family AT4G04885 37.017 7.46e-56 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev02g2205 CID 3.2e-13 CL0020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g2205 K14400 - gmx:100788958 1000.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g2205 02 23165666 23171088 Aev02g2205 02 23165666 23171088 ECH
Aev06g0353 06 2597188 2602001 Aev02g2205 02 23165666 23171088 PCT