Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g2197 ATGCATTCTGGTGGTGGTTCTTCTTCTACTCCTTCTGATTCCGGTGGGACGGGGCGACACCCCGTCTACCGTGGAGTTCGCAGAAGGAGTAGTGGAAAATGGGTGTCTGAGATTCGGGAACCGAGGAAGCCTAATAGGATTTGGTTAGGGACATTCCCTACACCTGAAATGGCTGCAGTTGCATATGATGTCGCCGCACTTGCCCTAAAGGGCAGAGATGCTGAGTTGAACTTTCCCAACTCAGCATCTTCGCTCCCAGTCCCGGCTTCATTGTCCGCACGTGACATTCAAGTTGCTGCTGCTAGTGCCGCTGCGGCTGCTGGGGCAGCAAAAGATGCTTTGTGCAATGCTCATGAGGGAAGAAACATCAATAATAATAGTAGTAGTAATAATAATTACAATTATAATTATAATGTTTCTTCTTCTCATGCTTCTTCACTGGCACAGGATTATGTGGATGAGGATTTGATCTTTGATATGCCTAATGTTCTGGTGAATATGGCACACGGAATGCTTCTTAGTCCTCCTCCGTTCGACATTGGTGGTGGCGGTGGTGCTAGTGGAGAAGGTACTAGTAACCAAGATAACATTGATGATGATGAAGATCAGCCAAGTCTTTGGAATTTTCCTTAA 633 0.4645 MHSGGGSSSTPSDSGGTGRHPVYRGVRRRSSGKWVSEIREPRKPNRIWLGTFPTPEMAAVAYDVAALALKGRDAELNFPNSASSLPVPASLSARDIQVAAASAAAAAGAAKDALCNAHEGRNINNNSSSNNNYNYNYNVSSSHASSLAQDYVDEDLIFDMPNVLVNMAHGMLLSPPPFDIGGGGGASGEGTSNQDNIDDDEDQPSLWNFP* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g2197 210 SUPERFAMILY DNA-binding domain 22 81 IPR016177 GO:0003677
Aev02g2197 210 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF024 9 210 - -
Aev02g2197 210 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
Aev02g2197 210 Pfam AP2 domain 21 71 IPR001471 GO:0003700|GO:0006355
Aev02g2197 210 MobiDBLite consensus disorder prediction 178 210 - -
Aev02g2197 210 PRINTS Ethylene responsive element binding protein signature 61 81 IPR001471 GO:0003700|GO:0006355
Aev02g2197 210 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Aev02g2197 210 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 9 210 - -
Aev02g2197 210 MobiDBLite consensus disorder prediction 1 32 - -
Aev02g2197 210 MobiDBLite consensus disorder prediction 1 16 - -
Aev02g2197 210 CDD AP2 23 81 IPR001471 GO:0003700|GO:0006355
Aev02g2197 210 Gene3D AP2/ERF domain 22 80 IPR036955 GO:0003700|GO:0006355
Aev02g2197 210 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g2197 Aev-Chr2 23118529 23119161 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g2197 10 176 AP2-EREBP Transcription Factor Family AT2G36450 66.071 1.22e-54 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aev02g2197 AP2 1.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g2197 - - vri:117920667 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g2197 02 23118529 23119161 Aev02g2197 02 23118529 23119161 ECH
Aev06g0357 06 2641104 2641706 Aev02g2197 02 23118529 23119161 PCT