Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev02g2189 | ATGAAGGTTATAGCTGCTTATTTGCTTGCTGTGCTTGGAGGCAACACTGACCCTTCGTCACATCTCATCAAGGACATTCTTGCCTCAGTTGGGGCTGAAGCAGAGGATGGTATGATTGAACTGCTTTTGTCTGAGGTTAAGGGTAAGGATATAGCCGAGGTTATTGCCTCCGGCAGGGAAAAATTGGCCTCCGTGCCTTGTGGTGGTGGTGGTGGTGCCGTTGCAGTCTCTGCTGCTCCTGGTGGAGGTGGCGGCGGTGCTGCTGCTCCTGCAGCTGCTGAGTCTAAGAAAGAGGAAAAGGTTGAGGAGAAAGAAGAATCTGATGATGATATGGGTTTCAGCCTCTTCGAGTAA | 354 | 0.5085 | MKVIAAYLLAVLGGNTDPSSHLIKDILASVGAEAEDGMIELLLSEVKGKDIAEVIASGREKLASVPCGGGGGAVAVSAAPGGGGGGAAAPAAAESKKEEKVEEKEESDDDMGFSLFE* | 118 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev02g2189 | 117 | PANTHER | 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER | 1 | 117 | IPR044076 | GO:0002182|GO:0003735|GO:0022625 | |
Aev02g2189 | 117 | Pfam | 60s Acidic ribosomal protein | 18 | 116 | - | - | |
Aev02g2189 | 117 | Gene3D | - | 1 | 59 | IPR038716 | - | |
Aev02g2189 | 117 | CDD | Ribosomal_P2 | 1 | 117 | IPR044076 | GO:0002182|GO:0003735|GO:0022625 | |
Aev02g2189 | 117 | PANTHER | 60S ACIDIC RIBOSOMAL PROTEIN P2-1 | 1 | 117 | - | - | |
Aev02g2189 | 117 | MobiDBLite | consensus disorder prediction | 79 | 117 | - | - | |
Aev02g2189 | 117 | Hamap | 50S ribosomal protein L12 [rpl12]. | 2 | 117 | IPR027534 | GO:0003735|GO:0005840|GO:0006414 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev02g2189 | Aev-Chr2 | 23062778 | 23063868 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev02g2189 | 1 | 117 | Cytoplasmic Ribosomal Protein Gene Family | AT3G44590 | 68.376 | 1.02e-29 | 101 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev02g2189 | K02943 | - | qsu:112012262 | 114.005 |