Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g2129 ATGACTATTTTCTCTCTTCAGTCTCATCTCTTCTCATCTAAAATCCCTTCAATCCCCTCACACACTAAGTCCTCAATCTTCAGCACCAACTTCAAAGGAATCAACACCATCCAATTCTCTTCTTCTTCCAAATCCACTCTCTTTCATCCAAGGATAATAACTGTTTTCTCTTCTTCAAAAGATAGTGATAATAATGCTGGGTCTAGTGGTGACAATACCCAAGGCAACTTTTGCATTATTGAGGGGCCAGAGACAGTTCAAGATTTTGTTCAGATGCAGTTGCAGGAAATTCAGGACAATATAAAGAGTAGGCGCAATAAAATCTTTCTTCTCATGGAAGAGGTAAGGAGATTACGCGTGCAGCAGCGCCTAAAAAGTCTGAGAAAAGTTGTTAGTGTGGAAGGAGAGGATGAAGCAAATGAGATGCCGGAAATTCCATCATCAATTCCTTTCCTTTCTCATGTGACGCCCAAGACTCTGAAGAAGCTCTATCTAACAAGCATATCATTCATATCTGCAATAATTGTATTTGGCGGGCTTATAGCACCAACGCTGGAGCTAAAATTAGGCATAGGTGGTACTTCATATGAAGATTTCATAAGAAGCATGCATTTGCCATTACAACTAAGTCAGGTCGACCCGATAGTGGCGTCCTTTTCAGGTGGGGCAGTCGGTGTGATTTCAGTGCTGATGTTAATTGAGGCTAATAATGTCGAGCAGCAAGAGAAAAAGATGTGCAAGTATTGCCATGGAACCGGATACTTAGCCTGTGCTCGGTGTTCCGCGAGCGGTGTATGCTTGAATATTGACCCTATTTCGGTGTCGAGTGCTTCCACCAGACCTCTTAAAGTTCCTACTACAAGAAGGTGTCCAAATTGCTCTGGTGCAGGAAAGAGGGAGAAGAAGAAGAAGAAGATGCAGATATTCGTGAAAACTCTAACTGGTAAAACCATAACTCTCGAGGTCGAGAGTAGTGATACCATCGACAATGTCAAAGCCAAAATTCAAGACAAGGAAGGAATCCCACCAGATCAGCAGCGTCTGATATTCGCTGGGAAGCAACTCGAAGATGGAAGGACCTTAGCTGATTACAACATTCAAAAGGAATCAACCCTTCATCTTGTGCTGAGGCTTCGTGGTGGAATAATCGAGCCTTCCTTGATGGCTTTGGCTCGCAAGTACAATCAAGACAAGATGATTTGCCGCAAATGCTATGCTCGTCTTCATCCAAGGGCTGTGAACTGCAGGAAGAAGAAATGTGGTCATAGCAATCAGTTGAGGCCAAAGAAGAAGATCAAGTAA 1302 0.4301 MTIFSLQSHLFSSKIPSIPSHTKSSIFSTNFKGINTIQFSSSSKSTLFHPRIITVFSSSKDSDNNAGSSGDNTQGNFCIIEGPETVQDFVQMQLQEIQDNIKSRRNKIFLLMEEVRRLRVQQRLKSLRKVVSVEGEDEANEMPEIPSSIPFLSHVTPKTLKKLYLTSISFISAIIVFGGLIAPTLELKLGIGGTSYEDFIRSMHLPLQLSQVDPIVASFSGGAVGVISVLMLIEANNVEQQEKKMCKYCHGTGYLACARCSASGVCLNIDPISVSSASTRPLKVPTTRRCPNCSGAGKREKKKKKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g2129 433 Pfam Ubiquitin family 308 379 IPR000626 GO:0005515
Aev02g2129 433 SMART Ribosomal_L40e_3 382 433 IPR001975 GO:0003735|GO:0005840|GO:0006412
Aev02g2129 433 Pfam Ribosomal L40e family 383 432 IPR001975 GO:0003735|GO:0005840|GO:0006412
Aev02g2129 433 Gene3D - 384 433 IPR038587 -
Aev02g2129 433 PANTHER PROTEIN ORANGE-LIKE, CHLOROPLASTIC 9 318 - -
Aev02g2129 433 ProSiteProfiles Ubiquitin domain profile. 306 381 IPR000626 GO:0005515
Aev02g2129 433 ProSitePatterns Ubiquitin domain signature. 332 357 IPR019954 -
Aev02g2129 433 SUPERFAMILY Ubiquitin-like 303 381 IPR029071 -
Aev02g2129 433 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 238 300 IPR036410 -
Aev02g2129 433 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 9 318 - -
Aev02g2129 433 SMART ubq_7 306 377 IPR000626 GO:0005515
Aev02g2129 433 CDD Ubl_ubiquitin 306 381 - -
Aev02g2129 433 Gene3D - 300 383 - -
Aev02g2129 433 PRINTS Ubiquitin signature 358 379 IPR019956 -
Aev02g2129 433 PRINTS Ubiquitin signature 316 336 IPR019956 -
Aev02g2129 433 PRINTS Ubiquitin signature 337 357 IPR019956 -
Aev02g2129 433 SUPERFAMILY Zn-binding ribosomal proteins 381 432 IPR011332 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g2129 Aev-Chr2 22714083 22720370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g2129 306 433 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 99.219 3.49e-89 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g2129 - - adu:107476187 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g2129 02 22714083 22720370 Aev02g2129 02 22714083 22720370 ECH