Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g2115 ATGTCCATAAATCACTACTCCTCCTTGGACCTTCCAGAAACTACACTTTGGTGGACTCAAAATCCTCAACAACAAATCCAAATTATGGAACCAATTCCAAATCCCTCTTGGTCTCTTCACCATCACAAAAACCTCTTCAACCTCAACCACAACGAAGAAGAACAAGAATTAGAACAACAAAACAACAACAATGAACAAGACACTACTACTTCACAAGAAGAGCAAGAAGGAGAACATGAACATCAACAACAAGAGGAAGAAGAAGAGAAAGAACCAATGTTCGAGAAACCATTGACTCCTAGTGATGTTGGGAAGTTAAACCGCTTGGTGATCCCGAAGCAGCACGCAGAGAAGTACTTTCCTCTAGGTGCAGCGATAACTTCTTCAACTGCTTCTGACTTTGGGGAGTGTAAAGGTTTGTTGCTTAGTTTCGAGGACGAGTCAGGAAAGTGTTGGAGGTTCCGTTACTCTTATTGGAACAGTAGTCAGAGCTATGTTTTGACGAAAGGATGGAGCCGTTACGTCAAGGACAAGCGCCTTGACGCTGGCGACATCGTTTCGTTTGAGCGCCACCGTGGCGACTCGCAGAGGCTGTTTATTAGGTGGAGGAGGCGGTCTTCTGTGGATGTCACGGTGGCGCAGGTTAGCAGAGCGGGACACGGTGGTGGCGGCGGTGACGGGAATAATGGGAAGAGTGGTGGTGGTGGTGGAGTGGGGTGGACCAGTGGGTTCTATCGTGCGCACCCTTCTTATCCTACGCATCATCATCAACAACAATTGGCGTATCAACACCAACAACATGAGGGGCTTCATGCAGGTGAAGGCAGTACTAGCCAAGGTTTGAACCAAAGGACAAGAGCAACAATATTAGGGAACTGTTCAAGTTCAAGTTCTTCAAGTTCAAAGGTACTTAGGCTTTTTGGGGTGAACATGGAATGCCAACCACAACATGAGGATGATGATTCAACACTACCAGAATGTTCCTACAATAATAATAATAACAATGTCATTAATCATAATCAACCTCCTAATTCTTATTCTAATTCTCACATGCTACATCAACAACCATACTATTACTAG 1080 0.4481 MSINHYSSLDLPETTLWWTQNPQQQIQIMEPIPNPSWSLHHHKNLFNLNHNEEEQELEQQNNNNEQDTTTSQEEQEGEHEHQQQEEEEEKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPLGAAITSSTASDFGECKGLLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDIVSFERHRGDSQRLFIRWRRRSSVDVTVAQVSRAGHGGGGGDGNNGKSGGGGGVGWTSGFYRAHPSYPTHHHQQQLAYQHQQHEGLHAGEGSTSQGLNQRTRATILGNCSSSSSSSSKVLRLFGVNMECQPQHEDDDSTLPECSYNNNNNNVINHNQPPNSYSNSHMLHQQPYYY* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g2115 359 SUPERFAMILY DNA-binding pseudobarrel domain 90 207 IPR015300 -
Aev02g2115 359 MobiDBLite consensus disorder prediction 315 359 - -
Aev02g2115 359 MobiDBLite consensus disorder prediction 54 101 - -
Aev02g2115 359 MobiDBLite consensus disorder prediction 249 280 - -
Aev02g2115 359 MobiDBLite consensus disorder prediction 72 96 - -
Aev02g2115 359 Coils Coil 43 70 - -
Aev02g2115 359 ProSiteProfiles B3 DNA-binding domain profile. 94 205 IPR003340 GO:0003677
Aev02g2115 359 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0156000 42 332 - -
Aev02g2115 359 CDD B3_DNA 92 196 IPR003340 GO:0003677
Aev02g2115 359 MobiDBLite consensus disorder prediction 216 235 - -
Aev02g2115 359 Gene3D - 82 216 IPR015300 -
Aev02g2115 359 SMART B3_2 94 206 IPR003340 GO:0003677
Aev02g2115 359 Pfam B3 DNA binding domain 94 206 IPR003340 GO:0003677
Aev02g2115 359 MobiDBLite consensus disorder prediction 252 280 - -
Aev02g2115 359 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 42 332 IPR044800 GO:0003700
Aev02g2115 359 MobiDBLite consensus disorder prediction 325 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g2115 Aev-Chr2 22637419 22640010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g2115 87 328 RAV Transcription Factor Family AT5G06250 49.194 2.88e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aev02g2115 B3 1.2e-28 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g2115 - - aprc:113872948 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g2115 02 22637419 22640010 Aev02g2115 02 22637419 22640010 ECH
Aev06g0431 06 3097555 3099397 Aev02g2115 02 22637419 22640010 PCT