Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g2102 ATGTCCGGTGGCGCTGAAGCTCCCAACCGCCGCCTGTCGCCGCCGCAGCAGCGAGAGCTTTCCGGCGCCTCGAACCGGCCGCCACTGAAGCGTCACCTCGCATTCGCGTCGACGAAGCCGTCGTTCGCTCCGCCGGACGAGTACCACAGCTTCTCCGTCGGCGCTGCCGACTCCGGCGGCGGGATAGTCGCCGCTGATCAGGAGACTGAAACTGTAGTTGTTAGATCTCCGTACACAAAGCTGAATGACGGGGCAAGTAACAACGAGGGAGACTCGCAAAAGTTTAGTAATGTACATGGATACATTAACATAGTGAATAGTCCCTTTAAAACTCCTATGTCGTCAAAAGGGGGAAGGATGCATAAGTCAAAGGTTTCCAAAGAAGGGATGTCATGTCCTCAGACACCAATCTCTAATGCTGGTTCGCCTTCTCCTCTTACTCCGGCTGGCAGCTGTCGATATGATAGTTCATTAGGTCTCTTGACAAAAAAGTTTGTCAATTTGGTCAAGCGTTCTGAGGATGGTATTCTTGACCTAAATCAAGCAGCGGAAACATTGGAGGTGCAAAAGAGGAGGATATACGACATTACTAATGTTTTGGAAGGCATTGGTCTCATCGAAAAGAAGCTCAAGAATAGAATACATTGGAAGGGAATTGAATCTTCTACAACTGGCGAGGTGGATGGTGATGTCTCTATTCTTAAGGAAGAAGTTGATAAACTCTCTTTGGAAGAGCACAGATTAGATGACCGAATAAGTGAAATGCAAGAAAGGCTGAGGAGTTTGAGTGAAGATGAAAACAGCCAGAAGTTCATTTTTGTGACCGAAGAAGATATCAAGAGCTTACCTTGCTTTCAGAATGAAACTCTGATAGCAATTAAAGCTCCGCATGGAACCACCCTGGAAGTCCCAGATCCTGAGGAAGCTGTTGACTATCTGCAGAGAAGATACAGAATCATTCTTAGAAGCACTATGGGCCCCATTGATGTTTACCTTATCAGTCAATTCGAAGAGAAGTTTGAAGATTTAAATGGTGCTGAGCCCCCTGTGAGCTTCCCACTTGCGTCGAGTTCAGGGTCCAATGAGCAACCAGTGACAGAAACACTTCCTGCAGAATGCAGTGGAAAAGGACTTGAGCCTCAAGCTCAGATCTCTTCGCATGCACACTCTGATCTAAACACTTCACAAGAGTGTGCCGGGGGCATGATGAAGATTGTCCCTTCAGATGTCGATAATGATGCGGATTATTGGCTTCTATCAGATGCTGATGTTAGCATAACAGATATGTGGAGAACAGATTTTATTCCTAAACTCCGCAAAACAGCCAGTGTTGATTGGAATGGGGTGGACGTGCTTCATCCTGACTTCGGAATCATCCCAAGGCCGCAAACTCCATCCGGGATTGCCGAATCTCCATCAACTGTAGCTAATTCTAATCAGAGAGGTAAACTACTTAGAGCAGTTGCTCGCATTGCGAATGTTGAGGATGCCCGTCCTCCAGAGCTGCTGGTATTCTTCAGTGATATCACTGACCATCTGTTCTGA 1545 0.4712 MSGGAEAPNRRLSPPQQRELSGASNRPPLKRHLAFASTKPSFAPPDEYHSFSVGAADSGGGIVAADQETETVVVRSPYTKLNDGASNNEGDSQKFSNVHGYINIVNSPFKTPMSSKGGRMHKSKVSKEGMSCPQTPISNAGSPSPLTPAGSCRYDSSLGLLTKKFVNLVKRSEDGILDLNQAAETLEVQKRRIYDITNVLEGIGLIEKKLKNRIHWKGIESSTTGEVDGDVSILKEEVDKLSLEEHRLDDRISEMQERLRSLSEDENSQKFIFVTEEDIKSLPCFQNETLIAIKAPHGTTLEVPDPEEAVDYLQRRYRIILRSTMGPIDVYLISQFEEKFEDLNGAEPPVSFPLASSSGSNEQPVTETLPAECSGKGLEPQAQISSHAHSDLNTSQECAGGMMKIVPSDVDNDADYWLLSDADVSITDMWRTDFIPKLRKTASVDWNGVDVLHPDFGIIPRPQTPSGIAESPSTVANSNQRGKLLRAVARIANVEDARPPELLVFFSDITDHLF* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g2102 514 MobiDBLite consensus disorder prediction 351 368 - -
Aev02g2102 514 Pfam E2F transcription factor CC-MB domain 234 334 IPR032198 GO:0046983
Aev02g2102 514 MobiDBLite consensus disorder prediction 379 393 - -
Aev02g2102 514 MobiDBLite consensus disorder prediction 351 393 - -
Aev02g2102 514 Pfam E2F/DP family winged-helix DNA-binding domain 155 218 IPR003316 GO:0005667|GO:0006355
Aev02g2102 514 SUPERFAMILY E2F-DP heterodimerization region 231 335 IPR037241 -
Aev02g2102 514 Coils Coil 238 265 - -
Aev02g2102 514 MobiDBLite consensus disorder prediction 1 56 - -
Aev02g2102 514 MobiDBLite consensus disorder prediction 110 148 - -
Aev02g2102 514 PANTHER TRANSCRIPTION FACTOR E2F 21 458 IPR015633 GO:0000978|GO:0006357
Aev02g2102 514 Gene3D - 147 220 IPR036388 -
Aev02g2102 514 SUPERFAMILY "Winged helix" DNA-binding domain 153 216 IPR036390 -
Aev02g2102 514 PANTHER E2F TRANSCRIPTION FACTOR 3-RELATED 21 458 - -
Aev02g2102 514 SMART E2F_TDP_2 153 218 IPR003316 GO:0005667|GO:0006355
Aev02g2102 514 MobiDBLite consensus disorder prediction 128 148 - -
Aev02g2102 514 Gene3D - 225 335 - -
Aev02g2102 514 CDD E2F_DD 231 335 IPR032198 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g2102 Aev-Chr2 22547324 22551500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g2102 27 481 E2F-DP Transcription Factor Family AT2G36010 54.717 2.00e-161 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Aev02g2102 E2F_CC-MB 1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g2102 K06620 - gmx:100811762 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g2102 02 22547324 22551500 Aev02g2102 02 22547324 22551500 ECH