Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g2070 ATGAAGGACCCTGTGACAGCAATAACAGGGATAACATATGACAGAGAAAGCATTGAGCAATGGCTATTCACAAACAAGAACACAACATGTCCTGTTTCCAAACAACCCTTACCAAAAGACTCTGATTTGACCCCTAATCACACCCTTAGGAGATTGATCCAAGCATGGTGTACACAAAATTCATCATTAGGAATTGATAGGATCCCAACTCCTAAACCACCCCTTAACAAGATTCAAGTCCTTAAGCTCCTCAAGGATCTCAACAAGGACCCCAAGTTGAAGCTCAAGAGTCTAAGGCAATTGGAGCTTCTTGCAGCAGAGAGTGAGAGGAACAAGAAGTGTTTGATTGAATCCGGTGTGCCGAAATCCATGATCATGTTCATAGTGAATTGTTACAAAAAGGGTCTTATTGATGAGGGTCTAGAAGAGGCCTTAAGTTTATTACAATTTGTTAAGGTACCTTCTATGGAAGTTAAGGCTCTAATGGCTGAGAATGACCAGGTTTTGGATTCTCTGACATGGGTTTTAGGATGTGAGATAGCAGAAAACTCTGTTGCTGTTAAATCACATGCTGTTTTGGTCATCAAAACTCTGATCCAAAAGTGTGATCATAGTGTCCTTGAGAGGCTAAAACCTGAATTCTTTGAGAGAATTGTGAAGGTTCTTAAACATGGTGTGATAACACAACAAGGTACTAGTGCTGCCCTGAAGATTCTGTTATGTGCTTGTCCTTGGGGGAGGAATAGGATCATGATGGTTGAATCTGGTGCTGTTTTTGAGGTAATTGAGGTTGAAATGATGGCACCAGAAAAGAGGATAACAGAGTTAACAATGGCAATTTTGTTCCATCTGTGTTCTTGTGCAAGTGGGAGAGCAGAGTTTTTGTGTCATAAAGGGTCAATTGCTGTTCTTACAGAGAGGATTTTGAAGGTATCTTCTGGGGTTGATGATAGGGCCATGTTTGTTCTGTCATTGATTTGTAAATTCTCTGCAACACAAATGGTTCTTCAAGAGATGTTGAAGGTTGGAACTTTTGCAAAACTTTGTATGTTGCTTCAAACTGATCATGCTAAGTATATAAAGGACAAAGCAATGGATATTCTTAAGTCTCATTCTGAGGTGAGAGAAGATAGAGATCGAAAGAGAGAAGAGGGACCGAGGCGGCCATGGCTTCTCGGCCGACGCGGCCATGGCTTCTCGGCCGACGCGGCGGCTAGCGGAGGACAAAGAAGGGTAGGGAAGAGAGGAAGGGGGATAGAGTCGCGGCTGTGTGGCGCTGCGATTGTTGAGGAGCTCCGTGGCTGTCGAGGGAGATGGTGGGGGCTGGCTGTGGCAGCCGCGGACACGGAAGGGAGCGGCGGCCGTTGGAGAACGAGAGCGACGGAGTGGAGGCGGCCCGGGAAGAAAAAGAAGGACGGAGGAAGGAGGATCGCGACTGCTAAGGCTGGAAAGCTCCTCGGCTGTGAAGACGGAGACCTCGCCGGCGCTGCTGCTGTGTTTCCGCCGTTGCTGCCGCTGGAGGACCTCGCGCCGCCGCCGCCACTGCTGATGATTCGAGGATGGAGGATGGAGGTCGCGGCTAACGGTCCATACACCGGTCTCCTCTGCTGCTGCCACCGATGGCGCCGCCGGCAGTGA 1638 0.4799 MKDPVTAITGITYDRESIEQWLFTNKNTTCPVSKQPLPKDSDLTPNHTLRRLIQAWCTQNSSLGIDRIPTPKPPLNKIQVLKLLKDLNKDPKLKLKSLRQLELLAAESERNKKCLIESGVPKSMIMFIVNCYKKGLIDEGLEEALSLLQFVKVPSMEVKALMAENDQVLDSLTWVLGCEIAENSVAVKSHAVLVIKTLIQKCDHSVLERLKPEFFERIVKVLKHGVITQQGTSAALKILLCACPWGRNRIMMVESGAVFEVIEVEMMAPEKRITELTMAILFHLCSCASGRAEFLCHKGSIAVLTERILKVSSGVDDRAMFVLSLICKFSATQMVLQEMLKVGTFAKLCMLLQTDHAKYIKDKAMDILKSHSEVREDRDRKREEGPRRPWLLGRRGHGFSADAAASGGQRRVGKRGRGIESRLCGAAIVEELRGCRGRWWGLAVAAADTEGSGGRWRTRATEWRRPGKKKKDGGRRIATAKAGKLLGCEDGDLAGAAAVFPPLLPLEDLAPPPPLLMIRGWRMEVAANGPYTGLLCCCHRWRRRQ* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g2070 545 Pfam U-box domain 1 61 IPR003613 GO:0004842|GO:0016567
Aev02g2070 545 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PUB24 1 375 - -
Aev02g2070 545 SUPERFAMILY ARM repeat 80 369 IPR016024 -
Aev02g2070 545 Gene3D - 78 391 IPR011989 -
Aev02g2070 545 Coils Coil 98 118 - -
Aev02g2070 545 SUPERFAMILY RING/U-box 1 66 - -
Aev02g2070 545 SMART Ubox_2 1 56 IPR003613 GO:0004842|GO:0016567
Aev02g2070 545 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 63 IPR013083 -
Aev02g2070 545 ProSiteProfiles U-box domain profile. 1 63 IPR003613 GO:0004842|GO:0016567
Aev02g2070 545 PANTHER WDSAM1 PROTEIN 1 375 IPR045185 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g2070 Aev-Chr2 22286389 22292315 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g2070 1 371 U-box Gene Family AT3G11840 42.067 4.61e-101 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g2070 - - gmx:100798446 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g2070 02 22286389 22292315 Aev02g2070 02 22286389 22292315 ECH
Aev06g0473 06 3413997 3415277 Aev02g2070 02 22286389 22292315 PCT