LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev02g2064	ATGGTAACAGCATGCTGGAGGAACATTACTTGCTCCGCTTCATTACCATCCCCAGAGCATCAACAAGAAGAACCACTAGGACAACGACTACGGCAACAACAACAAGAACAACGACGGCTACGACGACAACAATTACTACAACGGCAAAGACAAAGACAACACATTGATCTTAATGTTGCTAGTAGCAACCGTTTTGCGTGGAGCATTGATCTGGAGAGGCATTCATGTGGCGAATTCTCACATGCTGCGGCAAAAGTCAACATTGACATGAGGGGTTATAGCCAAGTTGAGGTTGGTTCCAATGCAATCTTGGTTGGAATCTATGATGGGCATGTTGGTGCACATGCTTCATGGTTCCTCAGAAGGAACCTCATGACCAACCTAATTGCAACAATTAAGGAAAAAGGAACTCTCACTAAAGAAGCTCTACAAGAAGCTATTACTATTACTGATTTTGGGTTTCTGAGCCTTGTTCAAAGGTCTCAAAGATTAGACCCGTCGATAGTTATCAATGGTTCAAGTTGTTTGGTTGGTGTTATTTGGAAAGGTACACTCATCATTGGACAAGTTGGTTCAGCTCGTGCTGTTAGTGGTGTGATGCAAGAATCTGATAACAGAATCATTGCTATGCCTTTGACCGTATCACACATTGTTAATGAGTCTTGGGTGATTAGACAACAACTTAGGGAAAAACATAAAAGAGATCCAAATATAGTCGTTCAAGGTGATGATGGGGTATGGCGTATTAAAGGCATTGGCGAGAGATCGCGATCGGTCGGCGATGCGTATTTAAAGCTAAGCTATATCAAAGTTGATTCAACATTTCTAGATTTCCAGTTACCTGGTGGTTATCTCGATGAGGCAGTAGTGTCAGATGAAGCAGATCTAAGTTCAAGACCAATAAAAGGCACTGATAGATTCTTCATATTTGCATCTTCTGGATTTTGGGAGCACATAACAAATGAAAGAGTTGTAGATATTGTTTGCACTAACCCAAGACAGGGAATTGCAAAAAGACTTCTTAAGGCTGTTCAAGTGGAGGCAGCTAGGAAAGCTAATAAGAGTTATAGTGATTTTGTTGCAATGCCATTTATGAATAGGGCAACTATTCATGATGATATTAGTGTGGTTGTGGTCTTTGTTGATCATAATCTTGTTGGTGTAAAAGATTCAGATTTGGAGAAAAGATCCTTCATAGGATTCAGAGTTGATGATGAATTGAGAACTTATAGCCAAGTTGATGTTGGTTCCAATGCAATCTTTGTTGGAATCTATGATGGCCGAGCTGGTCCTCATGCTTCCAAGTTCATCAGTAAGAACCTCATGACTCACCTAATAGCAAATATTAGGAACCATAACACTGTTGTAGAAGAAACTGTAGAGAATGCTGTTCTTACTACTGATGAAAGGACACACCCTTATGAAGAGAGATTCCTTGCTCTTCAAATGACATTGGAACACAATATTAACTATTTCTGGGTTAGACAAGGGGTTTTGGATTCACACAGTGATCCAAATCTTCTTGTTCGTGATGATAGTGGATTATGGAAAATTAAAGGTGTCACTGAGCTATCAAGATCCATTGGTGATGCATATTTAAAGAAAAGGAACATGATTGTTGATCCATCATTGACAGAGTTCCAATTATCTAGTCCTCTTATAGAGCCTGCTGTGTCAGCAGTGCCAATGTTAAATTCAAGACCTATAGAAGACTCTGATAGGTTCTTCATTTTTGGAAACCATGAATTTTGGAGCCTCATGACAAATGATAAAGCAATGGAAATTATCAACACTAACCCAAGAAATGGAATTGCAAGAAAATTGATTAATACTGCTCAACAAGAAGCTTGTAGGATAGCTGATATGGATTATAATGAGCTTAGTTCTATTCCAAAGGGGCCAAGGAAAGACATCCATGATGATATGAGTGTGGTTGTGGTCTTTGTTGATCTTGCTCTTGTTGGTGTTAAAGATACTAATTTGGAGCAGAGATCTTTCAAAGGGTTCACTGATGAAGTTGCAGAGTCACAGTTTAGGATCATTGATCAATTGATGTGA	2058	0.3936	MVTACWRNITCSASLPSPEHQQEEPLGQRLRQQQQEQRRLRRQQLLQRQRQRQHIDLNVASSNRFAWSIDLERHSCGEFSHAAAKVNIDMRGYSQVEVGSNAILVGIYDGHVGAHASWFLRRNLMTNLIATIKEKGTLTKEALQEAITITDFGFLSLVQRSQRLDPSIVINGSSCLVGVIWKGTLIIGQVGSARAVSGVMQESDNRIIAMPLTVSHIVNESWVIRQQLREKHKRDPNIVVQGDDGVWRIKGIGERSRSVGDAYLKLSYIKVDSTFLDFQLPGGYLDEAVVSDEADLSSRPIKGTDRFFIFASSGFWEHITNERVVDIVCTNPRQGIAKRLLKAVQVEAARKANKSYSDFVAMPFMNRATIHDDISVVVVFVDHNLVGVKDSDLEKRSFIGFRVDDELRTYSQVDVGSNAIFVGIYDGRAGPHASKFISKNLMTHLIANIRNHNTVVEETVENAVLTTDERTHPYEERFLALQMTLEHNINYFWVRQGVLDSHSDPNLLVRDDSGLWKIKGVTELSRSIGDAYLKKRNMIVDPSLTEFQLSSPLIEPAVSAVPMLNSRPIEDSDRFFIFGNHEFWSLMTNDKAMEIINTNPRNGIARKLINTAQQEACRIADMDYNELSSIPKGPRKDIHDDMSVVVVFVDLALVGVKDTNLEQRSFKGFTDEVAESQFRIIDQLM*	686

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev02g2064	685	ProSitePatterns	PPM-type phosphatase domain signature.	104	112	IPR000222	GO:0043169
	Aev02g2064	685	CDD	PP2Cc	85	381	IPR001932	-
	Aev02g2064	685	Pfam	Protein phosphatase 2C	514	617	IPR001932	-
	Aev02g2064	685	Pfam	Protein phosphatase 2C	97	343	IPR001932	-
	Aev02g2064	685	ProSiteProfiles	PPM-type phosphatase domain profile.	398	649	IPR001932	-
	Aev02g2064	685	ProSiteProfiles	PPM-type phosphatase domain profile.	80	381	IPR001932	-
	Aev02g2064	685	Gene3D	-	22	392	IPR036457	-
	Aev02g2064	685	SMART	PP2C_4	392	647	IPR001932	-
	Aev02g2064	685	SMART	PP2C_4	56	379	IPR001932	-
	Aev02g2064	685	PANTHER	PROTEIN PHOSPHATASE 2C 68-RELATED	51	392	-	-
	Aev02g2064	685	PANTHER	PROTEIN PHOSPHATASE 2C 68-RELATED	476	669	-	-
	Aev02g2064	685	Gene3D	-	477	651	IPR036457	-
	Aev02g2064	685	Gene3D	-	401	476	IPR036457	-
	Aev02g2064	685	SUPERFAMILY	PP2C-like	99	382	IPR036457	-
	Aev02g2064	685	PANTHER	PROTEIN PHOSPHATASE 2C 68-RELATED	406	469	-	-
	Aev02g2064	685	SUPERFAMILY	PP2C-like	413	650	IPR036457	-
	Aev02g2064	685	PANTHER	ALPHABET, ISOFORM E-RELATED	406	469	-	-
	Aev02g2064	685	PANTHER	ALPHABET, ISOFORM E-RELATED	51	392	-	-
	Aev02g2064	685	PANTHER	ALPHABET, ISOFORM E-RELATED	476	669	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev02g2064	Aev-Chr2	22219114	22226131	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev02g2064	392	681	PP2C-type Phosphatase Gene Family	AT5G06750	33.430	3.14e-58	200

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev02g2064	K01102		-	gmx:100778238	284.263