Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g2060 ATGAACGACTTGTTTTCCGGCTCATTTTCCCGAATCCGCAACAACCGCGACTCACCGGACCGCCACCATGTAATCGAGATGTCCTCCGTCGAATCCGCCACCGCCGCTGGAGGCGATCGCGGCGTTTACCTCGACAAATTCTTCGAGGACGTCGAATCGGTGAAGGAGGAGCTCAAGGAAATCGAGCGTTTGCTGGAGAGCTTACAGAGCAGCAACGAGCAGAGCAAGACTCTGCACCAAGCCTCCGCCGTCAAGGATCTCCGGTCGAAGATGGACGCCGACGTTTCGGCGGCGCTGAAGAAAGCCAAGGTGATCAAGCTCCGCCTTGAGGCTTTGGACCGGTCTAACGCGGCGAACCGGAATTTGCCAGGCTGTGGACCGGGTTCGTCTTCGGACCGGACCAGGACTTCGGTTGTGAACGGGTTGAAGAAGAAACTTAGGGATTCGATGGAGAGCTTCAATGAGCTGAGGCAGCAGATCTCGGCGGAGTACAGAGAAACCGTCCAGCGGCGGTATTTCACCGTTACCGGCGAGAATCCCGATGACAAGACGCTCGATCTCTTGATTTCTACCGGTGAGAGTGAGACTTTCCTTCAGAAAGCAATTCAAGAACAAGGCAGGGGTAGAATTCTCGACACCATAAACGAAATTCAAGAGAGGCATGATGCTGTGAAAGAGATAGAAAAGAATCTCAAGGAATTGCACCAGGTGTTCCTTGACATGGCAGTGTTGGTTCAATCTCAAGGTGAGCAATTGGATGACATCGAGAGCCACGTCGCAAGGGCTCATTCGTTCGTGGAGACCGGAACAGAGCGGTTGCAGACGGCGAGGAAGCTGCAAAAGAACACCAGGAAATGGACCTGTTTTTGTATCATACTGCTTCTGGTGATTGTCTTGATTGTGGTGCTCGCTGTCGTGAAACCGTGGAATAATGGCGGCGGTGGTAGTCAGCCTTCTCCGGCTCAACCGTCTCCTCCTCCTCCTCCTTCGCCTTCTACTGGTGCCTAA 1008 0.5367 MNDLFSGSFSRIRNNRDSPDRHHVIEMSSVESATAAGGDRGVYLDKFFEDVESVKEELKEIERLLESLQSSNEQSKTLHQASAVKDLRSKMDADVSAALKKAKVIKLRLEALDRSNAANRNLPGCGPGSSSDRTRTSVVNGLKKKLRDSMESFNELRQQISAEYRETVQRRYFTVTGENPDDKTLDLLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKEIEKNLKELHQVFLDMAVLVQSQGEQLDDIESHVARAHSFVETGTERLQTARKLQKNTRKWTCFCIILLLVIVLIVVLAVVKPWNNGGGGSQPSPAQPSPPPPPSPSTGA* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g2060 335 SMART tSNARE_6 209 276 IPR000727 -
Aev02g2060 335 Coils Coil 214 234 - -
Aev02g2060 335 MobiDBLite consensus disorder prediction 312 335 - -
Aev02g2060 335 PANTHER SYNTAXIN 7 314 IPR045242 -
Aev02g2060 335 Gene3D - 211 307 - -
Aev02g2060 335 Pfam Syntaxin 46 249 IPR006011 GO:0016020
Aev02g2060 335 SUPERFAMILY t-snare proteins 42 269 IPR010989 GO:0016020|GO:0016192
Aev02g2060 335 CDD SynN 44 201 IPR006011 GO:0016020
Aev02g2060 335 MobiDBLite consensus disorder prediction 319 335 - -
Aev02g2060 335 Pfam SNARE domain 250 302 IPR000727 -
Aev02g2060 335 SMART SynN_4 39 165 IPR006011 GO:0016020
Aev02g2060 335 Coils Coil 139 163 - -
Aev02g2060 335 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 214 276 IPR000727 -
Aev02g2060 335 Coils Coil 44 78 - -
Aev02g2060 335 CDD SNARE_syntaxin1-like 213 275 - -
Aev02g2060 335 PANTHER SYNTAXIN OF PLANTS 122 PROTEIN 7 314 - -
Aev02g2060 335 ProSitePatterns Syntaxin / epimorphin family signature. 220 259 IPR006012 GO:0005484|GO:0006886|GO:0016020
Aev02g2060 335 Gene3D - 41 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g2060 Aev-Chr2 22196862 22199151 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g2060 33 327 SNARE and Associated Proteins AT3G11820 74.267 1.19e-153 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g2060 K08486 - gmx:100809258 486.878