Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g2059 ATGAATGACTTGTTCTCCGGCTCGTTCTCACGCTTCCGCAACAACGATCAAGTTTCCCCAAACCACCATGTCGTTGAGATGGGGGCGGTGGATGGTGGCGGTGTCAACCTTGACAAGTTCTTTGAGGAGGTGGAGATGGTGAAGGACGAGTTGAAAGAGCTGGAGAAGCTCTATGAGAGTCTAAGAGTGTCCCATGAGAAGAGCAAGACCCTTCATAGCGCAAAAGCTGTGAAGGATCTTCGCGCCAACATGGATGCTGATGTGACAATTGCACTCAAAAAGGCAAAACTTGTCAAGGTCCGGCTTGAGGCACTAGACAAATCCAATGAGGCAAGTCGGAGCTTGCCTGGGTCTGGACCTGGTTCGTCGTCAGACCGAACCAGGACATCCGTGGTGAGCGGGTTGAGAAAGAAGTTGAAGGACTCTATGGAGAGCTTCAACAACTTGAGACAACAAATATCCTCAGAATACAGAGAAACAGTACAACGTAGATACTACACTGTTACGGGAGAAAACCCTGATGAGAAAACAATTGACCTCCTCATCTCTACAGGTGAAAGTGAAACTTTCTTACAAAAAGCCATTCAGCAACAAGGAAGAGCCACAATTATGGACACAATCCAAGAGATTCAAGAAAGGCATAACACAGTGATGGATATTGAAAGAAGCCTCAATGAGCTACACCAAGTTTTCTTAGACATGGCTGTGTTGGTCCAATCCCAAGGTCAACAAATTGATGACATAGAGAGCCACGTGGCACGAGCCAATTCGTACGTCCGGGGCGGGGTCCAGCAGCTCCATGTTGCAAGGAAGCACCAGAAGAACACAAGGAAGTGGACTTGCATAGCCATCATAATCTTGATCATTATCATATTGATCATAGTCCTCCCTATAGTTCTAAGAAATTAA 909 0.4653 MNDLFSGSFSRFRNNDQVSPNHHVVEMGAVDGGGVNLDKFFEEVEMVKDELKELEKLYESLRVSHEKSKTLHSAKAVKDLRANMDADVTIALKKAKLVKVRLEALDKSNEASRSLPGSGPGSSSDRTRTSVVSGLRKKLKDSMESFNNLRQQISSEYRETVQRRYYTVTGENPDEKTIDLLISTGESETFLQKAIQQQGRATIMDTIQEIQERHNTVMDIERSLNELHQVFLDMAVLVQSQGQQIDDIESHVARANSYVRGGVQQLHVARKHQKNTRKWTCIAIIILIIIILIIVLPIVLRN* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g2059 302 Pfam Syntaxin 39 242 IPR006011 GO:0016020
Aev02g2059 302 CDD SynN 37 194 IPR006011 GO:0016020
Aev02g2059 302 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 207 269 IPR000727 -
Aev02g2059 302 ProSitePatterns Syntaxin / epimorphin family signature. 213 252 IPR006012 GO:0005484|GO:0006886|GO:0016020
Aev02g2059 302 SUPERFAMILY t-snare proteins 35 262 IPR010989 GO:0016020|GO:0016192
Aev02g2059 302 Pfam SNARE domain 244 295 IPR000727 -
Aev02g2059 302 MobiDBLite consensus disorder prediction 108 132 - -
Aev02g2059 302 MobiDBLite consensus disorder prediction 111 130 - -
Aev02g2059 302 PANTHER SYNTAXIN OF PLANTS 122 PROTEIN 12 297 - -
Aev02g2059 302 SMART SynN_4 32 158 IPR006011 GO:0016020
Aev02g2059 302 Gene3D - 195 300 - -
Aev02g2059 302 Coils Coil 136 156 - -
Aev02g2059 302 Gene3D - 35 167 - -
Aev02g2059 302 CDD SNARE_syntaxin1-like 206 266 - -
Aev02g2059 302 SMART tSNARE_6 202 269 IPR000727 -
Aev02g2059 302 PANTHER SYNTAXIN 12 297 IPR045242 -
Aev02g2059 302 Coils Coil 37 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g2059 Aev-Chr2 22192573 22193974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g2059 33 281 SNARE and Associated Proteins AT3G11820 74.699 1.03e-139 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g2059 K08486 - gmx:100808718 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g2059 02 22192573 22193974 Aev02g2059 02 22192573 22193974 ECH
Aev06g0475 06 3434369 3435730 Aev02g2059 02 22192573 22193974 PCT