Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g2058 ATGGCTATGCAAACTGTTTATCTGAAAGAACATGATGGAATTGGTAACAACAATTCTGTTATTGGACCATGGTGGAGTGCATTTGGATCTCAATCTTCATCACTTTATAATGTTAATAATGGTAATAATGAATCTTGTGGCCAAATCATGAAAAGTTTCTCATTGGAGATTCCAAACTATGTAGACCAAATTTCTGGTTCCACTACTAATAAGCAATCAGTTAGAGGAATGGAACAGTTTACAATCTTTCCAGACTGTAAAATGTCTGCTGATGCACAAAAGCCTCAACCTACATTGTCTCTGCAGTCATCACTTGTCGATCCTCGCAATCGTTTCGAGCTCGGATTCAGTCAGCCTATGATTTGTGCAAAGTATCCTTATATGGATCAATTCTATGGACTCTTCTCAGCATATGCACCTCAAATTTCGGGACGTATAATGCTGCCACTTAACTTGACATCAGATGATGGACCAACTTATGTGAATGCTAAGCAGTACCATGGAATCCTCAGGCGCAGGCAGTCCAGGGCAAAAGCTGTTCTTGAGAACAAAATGATAAAGCGTCGCAAGCCATACATGCACGAATCGCGCCACCTCCATGCAATGCGACGACCAAGAGGATGCGGCGGCCGCTTTCTGAACACAAGGAACTCTGCAAATGGAAATAGCAAGAGTACCGGAAGTGAAGCGAACAACAACAAAAACAATAACAAAATTGGTGATCACCAACAATTTCTTTCTAGTGGCTCACAGAGTTCCGAGGTCCTGCAATCGGATCTTGGAACTCTGAACTCATCAAAAGATACAAATGGAAGCAGTCCAAACATCTCCTCAGAGGTGACAAGCATGTACTATCATCACATTGTTGGTTCTGCTATTCACTCTGTTACTGACATGATAGATCATCATAGTATTAGTAATGGTCATGATCATAGCATGATCATGCCGTCGAAATGGGTTGCAGCAGGTGGAAACTGTTGCAATCTTAATGTTTGA 996 0.4147 MAMQTVYLKEHDGIGNNNSVIGPWWSAFGSQSSSLYNVNNGNNESCGQIMKSFSLEIPNYVDQISGSTTNKQSVRGMEQFTIFPDCKMSADAQKPQPTLSLQSSLVDPRNRFELGFSQPMICAKYPYMDQFYGLFSAYAPQISGRIMLPLNLTSDDGPTYVNAKQYHGILRRRQSRAKAVLENKMIKRRKPYMHESRHLHAMRRPRGCGGRFLNTRNSANGNSKSTGSEANNNKNNNKIGDHQQFLSSGSQSSEVLQSDLGTLNSSKDTNGSSPNISSEVTSMYYHHIVGSAIHSVTDMIDHHSISNGHDHSMIMPSKWVAAGGNCCNLNV* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g2058 331 MobiDBLite consensus disorder prediction 193 256 - -
Aev02g2058 331 ProSiteProfiles NF-YA/HAP2 family profile. 155 215 IPR001289 GO:0003700|GO:0006355
Aev02g2058 331 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 3 329 IPR001289 GO:0003700|GO:0006355
Aev02g2058 331 PRINTS CCAAT-binding transcription factor subunit B signature 189 212 IPR001289 GO:0003700|GO:0006355
Aev02g2058 331 PRINTS CCAAT-binding transcription factor subunit B signature 158 180 IPR001289 GO:0003700|GO:0006355
Aev02g2058 331 SMART cbf3 154 215 IPR001289 GO:0003700|GO:0006355
Aev02g2058 331 MobiDBLite consensus disorder prediction 213 256 - -
Aev02g2058 331 Gene3D - 155 217 - -
Aev02g2058 331 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR 3 329 - -
Aev02g2058 331 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 158 212 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g2058 Aev-Chr2 22186107 22191080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g2058 1 331 CCAAT-HAP2 Transcription Factor Family AT3G05690 40.762 3.82e-59 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Aev02g2058 CBFB_NFYA 2.8e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g2058 K08064 - gmx:100808195 395.971