Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g2053 ATGAGCAACTCAACAACCAATTCCTCTGGATTCCTTGGATCCAACAACATAAGTGGATTTGGCTATGGAATAGGAATCTCAATTGGGATTCTTTTACTCATCACAACAATAACCTTAACCTCATACTTTTGCACAAGAGCACAAGTTCCTAGTACCAATGATGCTTCTACTTCTAGAAGAAGAAGGTCAAGGACCAACCCTGTTTTTCTAGAGCCACAACAACAGAACAACTCTGTTATTGTCGATGTGGGACTTGATGAGGAAACAATTCTTGGCTATCCAAAGTTGCTTTACTCAGAAGCAAATAAGATTAAGAAATATTCTGATTCAGCACCAACTTGTTGTTCTATATGTTTGGGAGATTATAAGGGTAGTGATGTTTTAAGGGTTTTGCCTGATTGTGAGCATGTGTTTCATCTCAAGTGTATAGATCCATGGTTGAGGCTTCATCCTACTTGTCCTCTTTGTAGAACTTCTCCAATTCCAACACCTCTTTCTACACCTCTTGCTGAAGTTGTTCCTTTAGCTACAAGAAGAGATTAA 543 0.3867 MSNSTTNSSGFLGSNNISGFGYGIGISIGILLLITTITLTSYFCTRAQVPSTNDASTSRRRRSRTNPVFLEPQQQNNSVIVDVGLDEETILGYPKLLYSEANKIKKYSDSAPTCCSICLGDYKGSDVLRVLPDCEHVFHLKCIDPWLRLHPTCPLCRTSPIPTPLSTPLAEVVPLATRRD* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g2053 180 PANTHER RING/U-BOX SUPERFAMILY PROTEIN-RELATED 5 180 - -
Aev02g2053 180 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 5 180 IPR045899 -
Aev02g2053 180 CDD RING-H2_PA-TM-RING 114 157 - -
Aev02g2053 180 SUPERFAMILY RING/U-box 114 162 - -
Aev02g2053 180 ProSiteProfiles Zinc finger RING-type profile. 115 157 IPR001841 -
Aev02g2053 180 SMART ring_2 115 156 IPR001841 -
Aev02g2053 180 Pfam Ring finger domain 115 157 IPR001841 -
Aev02g2053 180 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 161 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g2053 Aev-Chr2 22135492 22136034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g2053 14 178 C3H Transcription Factor Family AT5G06490 52.542 3.93e-58 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g2053 - - gmx:121172638 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0479 06 3465137 3465655 Aev02g2053 02 22135492 22136034 PCT