Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g2048 ATGGAAGCAAGAGAAGGAATTAGTTCTGGGGTTACAGTGATAGGAGCAGAAGCTCCATCAGCATACCATGTGGCACCAAGGAGTGAAGCTCCAAATCAGGTTCATGCCCCTGAAGCAGTGGCGGCGGCTGCGGCTGCTGGTGCGGTCGGTATCTCTCCGGTGAGTGTAGGGTTGGACGTAACGGTTAAGAAGAAGAGGGGTAGACCGAGGAAATATGGTCCTGATGGGTCTGTCACTATGGCATTGTCACCATTGCCAATCTCGTCGTCTGGTCCACATTCAAATGACTTTTCGTCATCTGGGAAGCGGGGGAAGCCGCGGGGGGTGGAGTATAAGCAGTCGAAAAAACTCGGGTTGGATCATCTAGGCGACTTATGCTCAGACGGTACAAACTTCATGCCACATATCATCACTGTCAATGCTGGAGAGGACATCACAATGAAGGTTATATCCTTTTCTCAACAAGGTCCCCGAGCGATATGCATCTTATCCGCAAATGGTGTAATTTCAAATGTTACACTTCGCCAGCCTGATTCTTCTGGGGGCACTTTGACCTATGAGGGCCGTTTTGAGATACTTTCCTTGTCTGGATCGTTCATGCCTACCGACAACCAAGGAACAAGAAGCAGGACAGGTGGAATGAGCGTGTCGCTGGCAAGCCCTGATGGTCGTGTCGTAGGTGGTGGTGTTGCTGGCCTTCTCATAGCCGCTAGTCCGGTGCAGGTGGTGGTTGGAAGTTTTCTACCAAGCAATCAGCAAGATCAAAAACCGAAGAAGCCGAAATCTGATTATGCACAAACAACAGTTACTCAAGCCATTGCTGTTTCTTCTGCCCCGCCCCCAAATAACGCCGAAAAGGACGACGTCATGGGCGGTGGACACGTGATGCAAAACTCGGGACCACTCAACGCAGCAAACCTCAATCCTCCCACAGCTTTTAGAAGAGATAATTGGGTCAACATGCACTCAATGCAAGACTCAAGAAAGTCAGCCACTGATATCAACATATCCTTGCCTGATAGTTAA 1026 0.4981 MEAREGISSGVTVIGAEAPSAYHVAPRSEAPNQVHAPEAVAAAAAAGAVGISPVSVGLDVTVKKKRGRPRKYGPDGSVTMALSPLPISSSGPHSNDFSSSGKRGKPRGVEYKQSKKLGLDHLGDLCSDGTNFMPHIITVNAGEDITMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTDNQGTRSRTGGMSVSLASPDGRVVGGGVAGLLIAASPVQVVVGSFLPSNQQDQKPKKPKSDYAQTTVTQAIAVSSAPPPNNAEKDDVMGGGHVMQNSGPLNAANLNPPTAFRRDNWVNMHSMQDSRKSATDINISLPDS* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g2048 341 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 340 - -
Aev02g2048 341 Gene3D - 134 273 - -
Aev02g2048 341 SUPERFAMILY AF0104/ALDC/Ptd012-like 132 251 - -
Aev02g2048 341 CDD DUF296 134 247 IPR005175 -
Aev02g2048 341 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 340 IPR039605 GO:0003680
Aev02g2048 341 MobiDBLite consensus disorder prediction 65 109 - -
Aev02g2048 341 Pfam Plants and Prokaryotes Conserved (PCC) domain 134 247 IPR005175 -
Aev02g2048 341 MobiDBLite consensus disorder prediction 82 101 - -
Aev02g2048 341 ProSiteProfiles PPC domain profile profile. 129 270 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g2048 Aev-Chr2 22088087 22090848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g2048 10 278 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 58.804 3.26e-103 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g2048 - - gmx:100793726 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3145 06 32997333 32999742 Aev02g2048 02 22088087 22090848 PCT