Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g2005 ATGGCCACTTATGCCACATTTTTGCTTCTTCTCTTCTTCACCATGTTCACCACAAACACTTTGTCCCTCCAAGAACTTGATTTGCTCCAAATGGCACAAACCCAAGTTTCACAAGCCATTAACAATAATTGGTTTGGGAAATTTGGGAGATTGCATAGTTTAGGACTAAACCAAGGCCTAATTAGGTCAAATCAAACAAGTGGCGGTGTTATGGCACTAAGAGATTGTGCTAAGCTCTATGAAGAGAGTGAGTCTAGGCTCTCTCATATGACATCAAATACTAATAGCTATACCAATGAAGATGCACTAATTTGGGTTAGTGGTGTGATGACAAACCACAAAACTTGTTTGGATGGATTGAAGGAAAAAGGGTATGTTGGAAGTGATGATGATGAGGTTTTGGGTAATAGAAACTTGACTATGTTTCTTAGCCAAGCTCTTGGTTTGTATGCAAAAAACAGAGGAAAAGCCAAAGCCAAAGGAGCACCTCAGAGGCCAATAATATCAAGATCAGAATCTGATATGTTAGCATCATGGAGTGCATCAACATCAAAAGCAGATTTGATAGTAGCACAAGATGGTTCAGGAACATACAGAACAATAAGAGATGCAGTGAATGCTCTTGCTTCAAGAGGTGGAAACCATGCTTCAAGATCAGTTATTTATGTGAAAGCAGGAGTGTACCATGAAAAGGTTGAGATTGGTAACAAGCTTCATAATGTTATGTTTGTTGGAGATGGCATCGACAAAACTATTGTCACTGGCAGTAGAAGTGTTGTTGAAGGTTCTACTACTCTTGGTTCAGCCACATTTGATGTATCAGGAGATGGATTTTGGGCCAAAGACATGACATTTGAGAACACAGCAGGCCCAGAAAAGCACCAAGCAGTTGCATTAAAAGTAAGTTCAGACCTTTCGGTCTTCTACCGGTGCAGTTTCAAAGGTTACCAAGACACACTCTACGTCCACTCGAACCGACAATTCTACCGAGACTGCACCATACACGGCACCATAGACTTCATCTTTGGTGATGCAGCTGCAGTTATTCAAAATAGTGACATATTCATTAGGAAACCAATGAGTCACCAATCAAATTTCATAACAGCACAAGGCAGAGATGATCCTAACAAACCAACAGGAATTTCAATTCAGAGTTGTAGGGTTAGGCCTTCATCAGAATTTGTTACATCTATGGGTTCAATTAAGACATATTTGGGAAGGCCTTGGAAGAAATATTCTAGAACAGTGGTGATTAAGAGTGATTTGGATGGATTGATTAACCCTAAAGGGTGGGGTGAGTGGAGTGGAGATTTTGCAATTAGGACTTTGTATTATGGTGAGTATTTGAATATAGGGAATGGTGCTAATATAAGGTATAGGGTTAATTGGCCTGGATTTCATGTTTTGAATAGTGTTGGTCAAGCTTCAGTGTTTTCTGTGGCTCAATTTTTGCAAGGGGAGAGGTGGATTCCTAATTCAGGGGTGCCATTTAATTTGGGAATTAATTAG 1509 0.3989 MATYATFLLLLFFTMFTTNTLSLQELDLLQMAQTQVSQAINNNWFGKFGRLHSLGLNQGLIRSNQTSGGVMALRDCAKLYEESESRLSHMTSNTNSYTNEDALIWVSGVMTNHKTCLDGLKEKGYVGSDDDEVLGNRNLTMFLSQALGLYAKNRGKAKAKGAPQRPIISRSESDMLASWSASTSKADLIVAQDGSGTYRTIRDAVNALASRGGNHASRSVIYVKAGVYHEKVEIGNKLHNVMFVGDGIDKTIVTGSRSVVEGSTTLGSATFDVSGDGFWAKDMTFENTAGPEKHQAVALKVSSDLSVFYRCSFKGYQDTLYVHSNRQFYRDCTIHGTIDFIFGDAAAVIQNSDIFIRKPMSHQSNFITAQGRDDPNKPTGISIQSCRVRPSSEFVTSMGSIKTYLGRPWKKYSRTVVIKSDLDGLINPKGWGEWSGDFAIRTLYYGEYLNIGNGANIRYRVNWPGFHVLNSVGQASVFSVAQFLQGERWIPNSGVPFNLGIN* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g2005 502 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 152 IPR035513 -
Aev02g2005 502 CDD PMEI-like_4 71 154 - -
Aev02g2005 502 Pfam Plant invertase/pectin methylesterase inhibitor 63 148 IPR006501 GO:0004857
Aev02g2005 502 Pfam Pectinesterase 187 487 IPR000070 GO:0030599|GO:0042545
Aev02g2005 502 SUPERFAMILY Pectin lyase-like 181 500 IPR011050 -
Aev02g2005 502 Gene3D - 181 501 IPR012334 -
Aev02g2005 502 SMART PMEI_2 31 149 IPR006501 GO:0004857
Aev02g2005 502 PANTHER PECTINESTERASE 4 499 - -
Aev02g2005 502 ProSitePatterns Pectinesterase signature 2. 334 343 IPR033131 -
Aev02g2005 502 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 36-RELATED 4 499 - -
Aev02g2005 502 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 54 127 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g2005 Aev-Chr2 21822092 21826706 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g2005 7 501 Carbohydrate Esterase AT3G60730 51.625 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g2005 K01051 - gmx:100792852 672.544