Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g2004 ATGACATCAACTTTTTTCCTCTTCAATCTTCTCATTGTTCCCTTTCTATTTTCTACCTTAGTTTATGGCTATTCTATGAATGACATTAAACTTTGGTGTAGTCAAACCCCAAATCCTCAACCATGTGAGTATTTCTTGAGCAATAATCCAACTCACCAATACAAGCCCATAAACCAAAAATCCGATTTCCTAAAACTCTCATTGCAACTTGCTCAAGAGAGAGCACTAATAGGGCATGCAAACACTCTTTCATTAGGCTCAAAGTGCCGTAACCCACAAGAAACAATTGCTTGGTCCGATTGTGTTGAGCTTTATGAGCAAACAATCAAAAAGCTCAACAAAACCTTAGACCCAAACACAAAATGCACCCAAGTTGATACCCAAACATGGCTTAGCACAGCACTCACAAACCTTGAGACATGCAAAGCCGGGTTCTATGAACTTGGGGTGCAAGACTATGTCCTCCCTCTTATGTCCAACAATGTTACTAAGTTACTAAGTAACACTTTGGCTCTTAACAAAGTTGAATATCAAGAGCCAAGTTACAAACAAGGGTTCCCAACATGGGTCAAGCCTGGTGATAGGAAATTGTTGCAAGCATCTTCCCCTGCTTCTCAGGCTAATGTGGTGGTGGCGAAAGATGGATCTGGAAAGTACACGACGGTGAGCGCAGCCGTAAATGCTGCTCCACAGAGTAGCAATGGAAGGTATGTGATATATGTGAAGGCAGGGATTTACAATGAGCAAGTTCAAATAAAGGCAAAAAATATTATGTTGGTTGGAGATGGTATCGGAAAAACCATAATCACCGGCAGCCAGAGTGTTGGAGGAGGCACCACAACCTTCCGTTCCGCCACTGTTGCTATTACTGGAGATGGATTTATTGCTCAGGGCATAACATTTAGGAACACAGCTGGTGCAGCAAACCATCAAGCAGTTGCACTACGTTCTGGATCAGACTTATCAGTATTCTACAAATGCAGCTTCGAAGGCTACCAAGACACACTATATGTATACTCTGACAGACAATTCTACAGAGAATGCGATATTTATGGCACAGTTGACTTCATCTTCGGCAACGCCGCAGTCGTGTTTCAAAACTGCAACCTCTTCGCAAGAAACCCTCCAAACAAAGTGAACACAATCACGGCTCAAGGCAGAACAGATCCAAATCAAAACACAGGCATTTCCATCCACAATTCAGTAGTTACAGCAGCTTCGGACCTGAAAGCGGTTCAGAGCTCTGTGAAGACTTATCTTGGAAGGCCATGGCAGCAATATTCGCGCACAGTGTTCATGAAGAGTTCTCTTGATAGTGTGATAGATCCAGCTGGATGGTTGGAATGGAGTGGTAACTTTGCATTAAGCACTCTGTACTATGGAGAGTACATGAACACAGGAGCTGGATCTTCAACAGCAAACAGAGTCAAATGGGCAGGGTATCATGTCATTACTACTGCTTCTGAGGCCTCTCAATTCTCTGTTGCTAATTTCATTGCTGGCAATTCTTGGTTACCATCTACTCGTGTGCCTTTCACTTCTACTCTTTAG 1551 0.43 MTSTFFLFNLLIVPFLFSTLVYGYSMNDIKLWCSQTPNPQPCEYFLSNNPTHQYKPINQKSDFLKLSLQLAQERALIGHANTLSLGSKCRNPQETIAWSDCVELYEQTIKKLNKTLDPNTKCTQVDTQTWLSTALTNLETCKAGFYELGVQDYVLPLMSNNVTKLLSNTLALNKVEYQEPSYKQGFPTWVKPGDRKLLQASSPASQANVVVAKDGSGKYTTVSAAVNAAPQSSNGRYVIYVKAGIYNEQVQIKAKNIMLVGDGIGKTIITGSQSVGGGTTTFRSATVAITGDGFIAQGITFRNTAGAANHQAVALRSGSDLSVFYKCSFEGYQDTLYVYSDRQFYRECDIYGTVDFIFGNAAVVFQNCNLFARNPPNKVNTITAQGRTDPNQNTGISIHNSVVTAASDLKAVQSSVKTYLGRPWQQYSRTVFMKSSLDSVIDPAGWLEWSGNFALSTLYYGEYMNTGAGSSTANRVKWAGYHVITTASEASQFSVANFIAGNSWLPSTRVPFTSTL* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g2004 516 Pfam Pectinesterase 208 502 IPR000070 GO:0030599|GO:0042545
Aev02g2004 516 Pfam Plant invertase/pectin methylesterase inhibitor 28 172 IPR006501 GO:0004857
Aev02g2004 516 PANTHER PECTINESTERASE 4 515 - -
Aev02g2004 516 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 175 IPR035513 -
Aev02g2004 516 ProSitePatterns Pectinesterase signature 2. 350 359 IPR033131 -
Aev02g2004 516 PANTHER PECTINESTERASE 4 515 - -
Aev02g2004 516 SUPERFAMILY Pectin lyase-like 202 515 IPR011050 -
Aev02g2004 516 CDD PMEI-like_3 31 174 - -
Aev02g2004 516 SMART PMEI_2 24 172 IPR006501 GO:0004857
Aev02g2004 516 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 175 IPR035513 -
Aev02g2004 516 SMART complete 241 419 IPR006633 -
Aev02g2004 516 TIGRFAM PME_inhib: pectinesterase inhibitor domain 1 174 IPR006501 GO:0004857
Aev02g2004 516 ProSitePatterns Pectinesterase signature 1. 233 252 IPR018040 -
Aev02g2004 516 Gene3D - 203 516 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g2004 Aev-Chr2 21817242 21819074 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g2004 6 516 Carbohydrate Esterase AT2G45220 66.016 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g2004 K01051 - gmx:100783964 906.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g2004 02 21817242 21819074 Aev02g2004 02 21817242 21819074 ECH