Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g2002 ATGGCACCACCATTATTTACCTTGTTAATAACAACACTTCTAATTGTTCCTTTTCTATTTTCCACTATTGCTTTCGGTTACTCATTAAATGAAATCAAATCATGGTGCAACCAAACACCATATCCTCAACCATGTGAGTACTATTTGAGCAATAATGCATATCTCAACAAACCCATAAAAAACAAATCCGATTTCCTCAAAGTGTCCCTTCAATTAGCCATAGAAAGAACACAAAAGGGCCAACAAAACACAATCTCACTAGGCCCTAAGTGTAGAAATGCACGTGAGAAAAGTGCTTGGAATGATTGTATTGAGCTTTATCAATACACAATACAAAAGCTCAATAAAACAATTGACCCCAACACTAAGTGCTCACAAGTTGATGCACAAACTTGGCTTAGCACAGCACTCACAAACCTTGAAACTTGCAAAGCCGGTTTCTATGACCTTGGTGTACAAGATTATGTGTTACCTATGTTGTCTAACAACAATGTAACATTGTTGTTAAGTAACATTCTTTCACTCAACAAGGGCAATGGTAATAATAATTACCCGTCAACGTCAAATTACGATGGTGGGTTCCCAAATTGGGTCAAATCTGGTGATAGGAAGCTATTGCAATCGTCTTCGGCTGCTTCGAAGGCGAATGTAATAGTGGCGAAAGATGGATCAGGAAAGTATACGACAGTGAAAGAAGCCATAAATGCTGCACCGAAGAGTAGTAGTGGAAGGTATGTGATATATGTGAAGAGTGGTGTGTACAATGAACAATTTGAGATTAAAGCAAAGAATATCATGTTGGTTGGAGATGGTATTGGAAAGACCATAATCACAGGTAGCAAAAGTGTTGGAGGAGGAAGCACAACCTTCAATTCTGCCACTGTTGCTGTTACTGGTGATGGATTTATTGCACAAGACATCACATTCAGAAACACAGCAGGAGCAGCTAACCACCAAGCAGTGGCACTACGATCCGGATCAGATCTCTCAGTCTTTTACCGATGTGGTTTCGAAGGTTACCAAGACACACTATATGTGCATTCAGAGAGACAATTCTACAGAGAGTGTGATATTTACGGCACCGTCGATTTCATCTTCGGTAACGCTGCAGTAGTCCTCCAAAACTGCAATATCTTTGCAAGAAACCCTCCTCAGAAAACCATCACAGTAACGGCTCAAGGTAGAACCGATCCAAACCAGAACACCGGAATTGTGATTCACAATTCTAAGGTAACAGGTGCCTCAGGTTTTATTAGCTCAAGCTCAGTTAAGTCATATCTTGGAAGACCATGGCAGAAATACTCAAGGACAGTGTTCATGAAGACTTTTCTTGATAGCTTGATTAATCAAGCAGGGTGGTTGGAATGGAGTGGTAATTTTGCATTGGATACTTTATATTATGCTGAATATGCAAATACAGGACCAGGCTCTTCAACTTCTAATAGGGTTAAATGGAAGGGTTACCATGTTCTTACAAGTGCTTCTCAAGCTTCACCATTCACTGTTGGGAATTTTATTGCTGGTGATTCATGGTTACCAAACACTGGTGTTCCTTTCACATCTGGCCTGTAA 1572 0.4008 MAPPLFTLLITTLLIVPFLFSTIAFGYSLNEIKSWCNQTPYPQPCEYYLSNNAYLNKPIKNKSDFLKVSLQLAIERTQKGQQNTISLGPKCRNAREKSAWNDCIELYQYTIQKLNKTIDPNTKCSQVDAQTWLSTALTNLETCKAGFYDLGVQDYVLPMLSNNNVTLLLSNILSLNKGNGNNNYPSTSNYDGGFPNWVKSGDRKLLQSSSAASKANVIVAKDGSGKYTTVKEAINAAPKSSSGRYVIYVKSGVYNEQFEIKAKNIMLVGDGIGKTIITGSKSVGGGSTTFNSATVAVTGDGFIAQDITFRNTAGAANHQAVALRSGSDLSVFYRCGFEGYQDTLYVHSERQFYRECDIYGTVDFIFGNAAVVLQNCNIFARNPPQKTITVTAQGRTDPNQNTGIVIHNSKVTGASGFISSSSVKSYLGRPWQKYSRTVFMKTFLDSLINQAGWLEWSGNFALDTLYYAEYANTGPGSSTSNRVKWKGYHVLTSASQASPFTVGNFIAGDSWLPNTGVPFTSGL* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g2002 523 ProSitePatterns Pectinesterase signature 1. 241 260 IPR018040 -
Aev02g2002 523 CDD PMEI-like_3 34 166 - -
Aev02g2002 523 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 178 IPR035513 -
Aev02g2002 523 PANTHER PECTINESTERASE 7 522 - -
Aev02g2002 523 SUPERFAMILY Pectin lyase-like 210 522 IPR011050 -
Aev02g2002 523 PANTHER PECTINESTERASE 7 522 - -
Aev02g2002 523 Pfam Pectinesterase 216 509 IPR000070 GO:0030599|GO:0042545
Aev02g2002 523 Pfam Plant invertase/pectin methylesterase inhibitor 31 175 IPR006501 GO:0004857
Aev02g2002 523 ProSitePatterns Pectinesterase signature 2. 358 367 IPR033131 -
Aev02g2002 523 SMART PMEI_2 27 175 IPR006501 GO:0004857
Aev02g2002 523 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 177 IPR035513 -
Aev02g2002 523 Gene3D - 210 523 IPR012334 -
Aev02g2002 523 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 176 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g2002 Aev-Chr2 21789516 21793311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g2002 6 523 Carbohydrate Esterase AT2G45220 65.511 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g2002 K01051 - gmx:100782892 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g2002 02 21789516 21793311 Aev02g2002 02 21789516 21793311 ECH