Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1998 ATGAGGTTCAAGCTTGGGAAGCGTGCAATTCGGGTCACCCGATGGATCTTCAGACGGTTTAGGACCCGACCCGGATACAAGCGCCTTGGTGGGTCATCAAGGCCGATGATGAAGCTTCTCAATTGGGGTCGCAAGTTGAGTAAAGGAGCAAAGTCACTAATATGCTCTAATGTGAAAAATGGGTCGGGTTATGTCCGGGTAGGATCCGACCCGACACCTTCGGTCCCGAAGGGTTACTTGGCGGTTTACGTGGGGCAGAAGGATGGCGATGAGTTCCGACGAGTGTTGGTGCCGGTGGTGTATTTCAACCACCCCTTGTTCGGGGAGCTTCTGAGGGAGGCAGAGGAGGAGTTCGGGTTTCAACACCCCGGTGGGATCACGATCCCTTGCCAGGTGGCCGAGTTTGAACAGACTATGTGGGTACCTCAAGGAGTGTGTGATTCTATGGACAGGATTATTCGAAGATTTGTGTGGGGCTTCCGCAATAATTCGAGGGGCTTAACTCCAGTAGCTTGGGAGACAATTAGTAAGCCTAAGGCCAAGGGGGGTCTCGGTTTAAGAAGTACAAAGTCTATGAACTACTCACTGCTTGGAAACCAGGTTTGGAAAATTCTGAATAGCCCTAACACTCTTTGGGCTATGCTTAAAACAAGAGATATTTTGAGGGAAGGTTTCTCTTACTCTATAGGGTCCGGGGATATGTCTCTTTGGGTACTGCCTAACCATGGAAGATTAAAAGAGGGATGGAGGTGGAGAGGTAATGAGTCTGGTATTTATTCTGCAGCTTCTGGTTATCACTGGCTAATCAACAAGGATCAGAGTAGAGATGATGAAGGGGGCTGGTCCTGGTTATGGAGATTGAAGATTCCAGAGAAATTCAAGCTTTTCCTGTGGCAAATTGGTTATAAGGCCCTAATAACAGAAGATTTCAGATATCAGAGAAATTTGTGTAATGATTCAGTTTGTAAAAGATGTGGTCTTGATGTGGAAACTATCATTCACTGCCTTAGAGACTGTATTTATAGTTCATCCATATGGACATCTCTTGGTTTTGGTTCTGATGGAGAATTCTTCAGTATGAATATAGATGATTGGATTAGAGTTCACATTATCCAGAGAAATGATATGTTATTCGTTACAATTATGTGGTGGAATTGGAGAGCTAGGAATCAAATGTTATTTGACCAAGATGCTTGGAGTGAACACAAGCTAAAACTGCTTATTACTAGAGACTTTAGGGATCTAGAGAGAAACTTGAAGAGGCAATGGAACACCATGTTAAGAGCTACAAGAATCGTGCACTGGCTGAAACCGATGGAGGGGGAATTCAAGTTGAACACTGATGGTAGCAGAGCTTTTGTTCAGGGCGATTATAAAGCAGGATTTGGGGGTGTTTTTCGCAATAGTACTGGTAATTGGATTCTAGGGTTCTATGGAGCGATGGGAGAAGGTGAAGTTCTTGAAGCAGAGCTTTTGGCTATCAAAGTTGGGATCCAACTAGCTTGGGAAAGGGGATGGAGAAAGATTTGGTGTGAGAGTGATTCTCTGAATGCAGTAACCCTCATTGAAGAAGAAGGGGTAGCAGATTACCTTGCAAGGAAGGGCGGAGAAGATTCTGCGAAGCTCAGCATCCTTCTGCATCCGCCATTGGAGCTCTGCACCTTGCTTGAAGAAGACGCTGCTGGAAGAAGCTTCACGCGAGCTTAG 1707 0.4558 MRFKLGKRAIRVTRWIFRRFRTRPGYKRLGGSSRPMMKLLNWGRKLSKGAKSLICSNVKNGSGYVRVGSDPTPSVPKGYLAVYVGQKDGDEFRRVLVPVVYFNHPLFGELLREAEEEFGFQHPGGITIPCQVAEFEQTMWVPQGVCDSMDRIIRRFVWGFRNNSRGLTPVAWETISKPKAKGGLGLRSTKSMNYSLLGNQVWKILNSPNTLWAMLKTRDILREGFSYSIGSGDMSLWVLPNHGRLKEGWRWRGNESGIYSAASGYHWLINKDQSRDDEGGWSWLWRLKIPEKFKLFLWQIGYKALITEDFRYQRNLCNDSVCKRCGLDVETIIHCLRDCIYSSSIWTSLGFGSDGEFFSMNIDDWIRVHIIQRNDMLFVTIMWWNWRARNQMLFDQDAWSEHKLKLLITRDFRDLERNLKRQWNTMLRATRIVHWLKPMEGEFKLNTDGSRAFVQGDYKAGFGGVFRNSTGNWILGFYGAMGEGEVLEAELLAIKVGIQLAWERGWRKIWCESDSLNAVTLIEEEGVADYLARKGGEDSAKLSILLHPPLELCTLLEEDAAGRSFTRA* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1998 568 Gene3D - 441 546 IPR036397 GO:0003676
Aev02g1998 568 SUPERFAMILY Ribonuclease H-like 443 524 IPR012337 -
Aev02g1998 568 Pfam Reverse transcriptase-like 446 525 IPR002156 GO:0003676|GO:0004523
Aev02g1998 568 CDD RNase_H_like 445 526 IPR044730 -
Aev02g1998 568 Pfam zinc-binding in reverse transcriptase 259 346 IPR026960 -
Aev02g1998 568 Pfam Auxin responsive protein 69 140 IPR003676 GO:0009733
Aev02g1998 568 PANTHER SMALL AUXIN-UP RNA-RELATED 2 137 - -
Aev02g1998 568 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 137 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1998 Aev-Chr2 21759853 21765376 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1998 70 136 Calmodulin-binding Proteins AT3G43120 53.731 4.81e-19 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1998 K14488 - pop:112323639 221.476