Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1996 ATGTTCATTGTAACTTCTGTGACACTGTCCTCGCGTTGTCGAATTCCAACTTTATTTTATTATCATGTTCTAGCCAGCCAGGTGAGTGTTCCTTGCACAAGTTTGTTCAAGACTGTGACAGTGAGATGTGGGCATTGCACCAACCTTCTCTCAGTGAACATGAGAGGCCTTCTTCTCCCCGCTTCCTCTCCCAATCACCAGCTCCATCACCTTGCTCACACTTTCTTCACTCCTCAAAATCTTCTGGAGGAGATTCGGAATGCACCTTCAACAAACATGATGAATCATCATCATCATCAGCTTCCAAACCCTAATGATTTGATGATGAGCAACATTAGAGCAGGAGTTGGACCTGAAGAAACCCCTAAGCCTCCACCAGCTAATAGACCTCCAGAGAAGAGACAGAGAGTTCCATCTGCTTACAACCGCTTCATCAAAGATGAGATCCAACGTATCAAGGCTGGGAATCCTGATATAAGCCACAGAGAGGCCTTTAGTGCAGCTGCAAAGAATTGGGCCCATTTTCCACACATTCATTTCGGACTTATGCCTGATCATCAACCCGTGAAGAAAGCTAATGTTCGCCAGGAAGCTGAGGACGTGCTTATGAAAGATGGGTTTTTCTCACCGGCAAATGTAGGCGTCTCTCCCTACTAG 657 0.4597 MFIVTSVTLSSRCRIPTLFYYHVLASQVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLLPASSPNHQLHHLAHTFFTPQNLLEEIRNAPSTNMMNHHHHQLPNPNDLMMSNIRAGVGPEETPKPPPANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQEAEDVLMKDGFFSPANVGVSPY* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1996 218 PANTHER PROTEIN YABBY 6-RELATED 23 216 IPR006780 GO:0007275
Aev02g1996 218 SUPERFAMILY HMG-box 124 176 IPR036910 -
Aev02g1996 218 Pfam YABBY protein 27 182 IPR006780 GO:0007275
Aev02g1996 218 PANTHER PROTEIN YABBY 4 23 216 - -
Aev02g1996 218 Gene3D High mobility group box domain 120 200 IPR036910 -
Aev02g1996 218 MobiDBLite consensus disorder prediction 114 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1996 Aev-Chr2 21724925 21729080 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1996 27 216 C2C2-YABBY Transcription Factor Family AT4G00180 63.768 4.79e-69 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Aev02g1996 YABBY 1.7e-60 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1996 K25796 - gmx:100781267 316.235