Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1975 ATGGAGAAGCACAAGTGCAAGCGTTGCTTCAGGAATTTCTCAAATGGAAGAGCTTTAGGGGGTCACATGAGGTCTCACGTGATGAATAACCTTCACGTTCAACCAAAGCCCAACGAGTCACCACCAACGGTTCAACTCAGCTTCGAGGCCGAGTCATCTTCAACCCCGTCTTCATCATCATCTTCAGAAGAAGAAGAAGAAGATAACAAGGGACTCTGTTATGGCCTAAGGGAGAATCCCAAGAGAAGCTTCCGAATCGCCGATCCGGAGTTTTCATTCGCTGCTGCAGCGGACACGGGATCAGTAATACTCCAGGACAGAGAGAGCGAGACCGAGTCATCACGCAACGTCACTCGTCGACGATCCAAGCGAGATTGGAAACTCGCCGAGTTTAACAAGAAGATTAAGCTGAGTCAACCCGGTAACCGCAACGAGTCGGAGAGCTCTGCATCGGACATGACCACCGAGGAGGACGTCGCATTCTGCCTCATGCTCCTCTCACGTGACAACAACACCAAGTGGATTCAGAGACACCCACAACAACAACAAGAACAAGAAGACGAATTCGAAGAAGAAGAAGAAGAAGAAGAAGAGGATGATCTTGATCTTGAAGACGAAGAAGAAGAAGAAGAAGAAGAGAGTGATGGGTACGAAGAGATGAAGAACAAGACGATGAAGACGAACAAGGTTCGAGGAGGAAGGTACAAATGCGAGACGTGTGAGAGAGTATTCAGGTCCTATCAAGCATTGGGTGGACACAGAGCGAGTCACAAGAAAATCAAACCCGAATCATCATCGATTCTTCCAATTGATCACAAGAATCTTAATAATGCTATTGTTCTTGTTGCTTCTTCTTCTTCCGATGCTCCTCAACAGAATCGCAATATCAATAGTAACAAGTTCAAGAAAATTCACGAATGCCCAGTTTGTTTTCGGGTTTTCGCATCGGGTCAAGCACTCGGAGGACACAAGAGGACTCACGTTCTAACCACCGTGCCGGCCACGACGGTGACGAGAGCTGCGGCGGTGGCCAACGTGGCGGCGAGTTCTTCAACGAAGCTCGCCGGACGAGAGAGTTTCATAGATCTTAACCTCCCTGCACCGGTGGATGATGATGAATTGAGCCAATTTGATGATTCTGCAGTTTCAGATGCTGAATGTTTCAAACCAGTGCTAAAGGTTCTTCCTAGATGA 1194 0.4782 MEKHKCKRCFRNFSNGRALGGHMRSHVMNNLHVQPKPNESPPTVQLSFEAESSSTPSSSSSSEEEEEDNKGLCYGLRENPKRSFRIADPEFSFAAAADTGSVILQDRESETESSRNVTRRRSKRDWKLAEFNKKIKLSQPGNRNESESSASDMTTEEDVAFCLMLLSRDNNTKWIQRHPQQQQEQEDEFEEEEEEEEEDDLDLEDEEEEEEEESDGYEEMKNKTMKTNKVRGGRYKCETCERVFRSYQALGGHRASHKKIKPESSSILPIDHKNLNNAIVLVASSSSDAPQQNRNINSNKFKKIHECPVCFRVFASGQALGGHKRTHVLTTVPATTVTRAAAVANVAASSSTKLAGRESFIDLNLPAPVDDDELSQFDDSAVSDAECFKPVLKVLPR* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1975 397 MobiDBLite consensus disorder prediction 185 216 - -
Aev02g1975 397 Coils Coil 175 223 - -
Aev02g1975 397 ProSiteProfiles Zinc finger C2H2 type domain profile. 305 327 IPR013087 -
Aev02g1975 397 ProSiteProfiles Zinc finger C2H2 type domain profile. 235 262 IPR013087 -
Aev02g1975 397 PANTHER CYS2/HIS2 ZINC-FINGER TRANSCRIPTION FACTOR 1 388 - -
Aev02g1975 397 MobiDBLite consensus disorder prediction 32 75 - -
Aev02g1975 397 MobiDBLite consensus disorder prediction 32 60 - -
Aev02g1975 397 Pfam C2H2-type zinc finger 305 327 - -
Aev02g1975 397 Pfam C2H2-type zinc finger 4 26 - -
Aev02g1975 397 Pfam C2H2-type zinc finger 234 259 - -
Aev02g1975 397 SUPERFAMILY beta-beta-alpha zinc fingers 234 327 IPR036236 -
Aev02g1975 397 ProSitePatterns Zinc finger C2H2 type domain signature. 307 327 IPR013087 -
Aev02g1975 397 MobiDBLite consensus disorder prediction 95 123 - -
Aev02g1975 397 ProSiteProfiles Zinc finger C2H2 type domain profile. 4 37 IPR013087 -
Aev02g1975 397 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 1 388 IPR044303 GO:0006355
Aev02g1975 397 MobiDBLite consensus disorder prediction 176 225 - -
Aev02g1975 397 ProSitePatterns Zinc finger C2H2 type domain signature. 237 257 IPR013087 -
Aev02g1975 397 MobiDBLite consensus disorder prediction 108 123 - -
Aev02g1975 397 ProSitePatterns Zinc finger C2H2 type domain signature. 6 26 IPR013087 -
Aev02g1975 397 SMART c2h2final6 305 327 IPR013087 -
Aev02g1975 397 SMART c2h2final6 4 26 IPR013087 -
Aev02g1975 397 SMART c2h2final6 235 257 IPR013087 -
Aev02g1975 397 Gene3D Classic Zinc Finger 232 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1975 Aev-Chr2 21528149 21529342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1975 1 375 C2H2 Transcription Factor Family AT3G60580 40.206 4.51e-67 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev02g1975 zf-C2H2_6 7.4e-11 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1975 - - adu:107475462 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g1975 02 21528149 21529342 Aev02g1975 02 21528149 21529342 ECH