Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1974 ATGAGGGCACATGGCATAGGAGATGAAACAGGGCACATGGATGATGATGACCCTGCTAGTGATTGGGAAGATAGGCTTGGTGGAAATGTTCCACCTAGCAACAAACGCATGTATGCATTAAGGACAAATCCAAATAGGTTAAAGAGTTGCCGAGTTTGTGAGAATTGTGGGAAGGAATTCTTGTCTTGGAAATCTTTCCTAGAGCATGGAAAATGCACCTCTGAGGATGCTGAATCCCTCGTATCCTCTCCGGGATCAGATGTCGCTGATGACGGCATCGGAGGCCGGAGAGGATGCGGTTGGTCCAAAAGGAAGAGGTCATTAAGAGCCAAAGTTGGTAGCTTCAATTATAACTGCCCTTCAAGCGAGGAGGAAGAGCTAGCAAATTGTTTGATGATGTTATCGAATGCGATTGTTGATCCTCTGGTGGCAGAGCCAGAAGAGTCATGTGCATCGGCTAGCAAAGAGGAGGAAAGAAGAAACCCAATGAACTTCATTGCACCATTCTCATCATGCAAAGTCCCTATTGATAGCAACAACAAAGCCAAAGGGGTTGCAAAGGGCTTGTTTGAATGCAAAGCATGCAAGAAAGTGTTCAATTCACACCAAGCATTGGGTGGCCATAGGGCTAGCCACAAGAAGGTAAAGGGATGTTTTGCTGCAAGACTAGACAACCTTGAAGACAACCTAGTTGAGGATGATGTGATCACACATGAAGAGTTCTTCCCTACAAAATCAAACTCAACCCTCCAATTTGATCACCACAATCATGGATCTACATTGGCATCTTCATCCAAGAAGAAATCAAAGGTTCATGAATGTTCAATATGTCATAGGAGCTTCTCTTCAGGGCAAGCATTAGGAGGCCACAAGAGATGCCATTGGATCACATCAAATGCCCCAGACACTTCAACATTGGCTAGGTTCCAACAATTTCAAGATCATTTGGATCAAATACCGAAATTCGACGGATCGACAGAGCCACTAGATCTAAAACTAGATCTTAACCTCCCCGCGCCGACGAATGATCCTTCTAGAAGGATCAATATGAACAACAATGTGTCCACTGAAATTTTCTTGCAGCCATGGGTTGGTGGGACAAAGGAGAATAATAATGTTGTTGTTACAACAAAAGATGATAATAATAGTACTCCTAGTCATCAACAGAACAATCAAAACCAAATTGATCACAATAACAATGAGAATGTTATTATTGATGAGGAAAAAAACAATGAGGTTGGGAATAATAATAATAATGGTTTGATGCAAAATGTGGATAATGAAGCTGATAGTAAGGTGAAGTTAGCAAAACTTAGTGAGCTAAAGGACATGAACATTGGTGGAAGTTCATCTCCATGGTTGCAGGTTGGAATTGGTCCAACAACTGATGTTGCTTCAGATCATTAA 1407 0.4208 MRAHGIGDETGHMDDDDPASDWEDRLGGNVPPSNKRMYALRTNPNRLKSCRVCENCGKEFLSWKSFLEHGKCTSEDAESLVSSPGSDVADDGIGGRRGCGWSKRKRSLRAKVGSFNYNCPSSEEEELANCLMMLSNAIVDPLVAEPEESCASASKEEERRNPMNFIAPFSSCKVPIDSNNKAKGVAKGLFECKACKKVFNSHQALGGHRASHKKVKGCFAARLDNLEDNLVEDDVITHEEFFPTKSNSTLQFDHHNHGSTLASSSKKKSKVHECSICHRSFSSGQALGGHKRCHWITSNAPDTSTLARFQQFQDHLDQIPKFDGSTEPLDLKLDLNLPAPTNDPSRRINMNNNVSTEIFLQPWVGGTKENNNVVVTTKDDNNSTPSHQQNNQNQIDHNNNENVIIDEEKNNEVGNNNNNGLMQNVDNEADSKVKLAKLSELKDMNIGGSSSPWLQVGIGPTTDVASDH* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1974 468 Pfam C2H2-type zinc finger 190 214 - -
Aev02g1974 468 Pfam C2H2-type zinc finger 271 296 - -
Aev02g1974 468 ProSitePatterns Zinc finger C2H2 type domain signature. 192 212 IPR013087 -
Aev02g1974 468 PANTHER OS02G0659100 PROTEIN 1 467 - -
Aev02g1974 468 PANTHER OS02G0659100 PROTEIN 1 467 - -
Aev02g1974 468 MobiDBLite consensus disorder prediction 1 36 - -
Aev02g1974 468 ProSiteProfiles Zinc finger C2H2 type domain profile. 190 217 IPR013087 -
Aev02g1974 468 SMART c2h2final6 272 294 IPR013087 -
Aev02g1974 468 SMART c2h2final6 190 212 IPR013087 -
Aev02g1974 468 SUPERFAMILY beta-beta-alpha zinc fingers 189 294 IPR036236 -
Aev02g1974 468 ProSitePatterns Zinc finger C2H2 type domain signature. 274 294 IPR013087 -
Aev02g1974 468 ProSiteProfiles Zinc finger C2H2 type domain profile. 272 294 IPR013087 -
Aev02g1974 468 MobiDBLite consensus disorder prediction 378 397 - -
Aev02g1974 468 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1974 Aev-Chr2 21519167 21520573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1974 103 337 C2H2 Transcription Factor Family AT1G02040 37.500 7.50e-34 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev02g1974 zf-C2H2_6 1.5e-12 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1974 - - ahf:112720137 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g1974 02 21519167 21520573 Aev02g1974 02 21519167 21520573 ECH