Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1972 ATGGCTTTAGGTGGAACAGCTCCCCCAAGAGGAAGTGCAGCAGCAGCTGCAAGCTTGAGGAGAAGGAGAACGACCAGCGGTGGTGCCTCCGGAGGCGCAGCCGGAACCATGCTCCAATTCTACACTGATGATGCTCCAGGGCTCAAGATCTCCCCAAATGTGGTTCTTGTAATGAGCATCGGCTTCATAGCATTTGTCGCCGTCCTTCATGTGATGGGAAAGCTCTATTTTGTTAGTGTTGTTGTTATTGTTGGTGGTGGTGGTGTTTGGTTCATATGTTCTGCTTTTTTGGGACCCATCAACCTTTTTTTTCTCTACCATATTCAAGCAATTAATGAAATGACATCGTCCTTGTTAAAGGACACAGTTTTCAATGATGATGTGTTGGGTTTGATTGTGTTCAAAGCTGGTCTTCAAGACCCAAAAGGGAAACTCACTACATGGAATGAAGATGATTATACTCCTTGCAATTGGGTTGGTGTCAAATGTGACCCTTCAACAAATAGGGTCAATGCCCTTGTCCTTGATGGATTCTCACTTTCTGGCCACATTGATAGAGGGCTATTGAGATTGCAGTTCCTTCAAATCTTGTCACTTTCAAGGAACAACTTCACAGGTTTCATAAACCCTGATCTAACAAGCCTTGGGAATTTGCAAGTTCTTGATCTGAGTGAGAACAACCTCTCTGGACAAATCCCACATGGGTTTTTCCAACAATGTTGGTCTCTAAGATCAGTTTCATTTGCTAATAACAACCTCACAGGTAAGATTCCTGATTCATTGACCTCTTGCACCTCATTGGAAACTCTTAATTTTTCCTCTAATCGGTTAAATGGTGAATTGCCATCCGGGGTGTGGTTTTTGAAGGGGTTGCAATCATTTGATCTTTCAAGTAACTTGCTTGAGGGAGAGGTTCCTGAAGGAATTCAGTATCTGTATGATTTGAGGGAATTAAGGCTTGGCAAAAACCGATTCATCGGTAGGATTCCTGAGGATATTGGAGGGTGCTTGCTTCTGAAGCTGATTGATTTCAGTGGCAATTTTCTATCTGGAAAACTTCCTGAGTCATTGCAGAGACTCACCTCATGCACATCCCTGAGTTTGCAGGGAAATTCATTCACCGGAGGGATTCCGAATTGGATTGGAGAGTTGAAGAATCTAGAGATGTTGGACCTTTCTGCAAATAGATTCTCCGGTTGGATTCCAAAATCAATTGGTAATCTTGACTCTCTGAGTGTATTAAACTTTTCCAGGAATGAAATCACAGGAAATTTTCCAGATTCAATGGTAAACTGCATTAGGCTTTTAGTTCTTGACATAAGTCACAACCACATGGAAGGTTCTATTCCTTCATGGATATTTAAGATGGGTTTAGAAAGTGTTTCACTTTCTGGAAACAGGTTCAGTAAGTCCATACCAGTTTCTTATCATGGTCTGCAGGTTTTGGACTTGTCATCGAATGCATTTTCCGGCAAAGTTCCGAATGCCATCGGAGGCCTAAGCAGTTTGCAGGTCTTGAATTTGTCCTCCAATAACATCTCTGGTACTATTCCAGTGAGTATAGGACAACTCAAATCTTTGTACATTCTTGACTTGAGTGGCAACAAGCTTAATGGAACCATTCCTTCTGAAATAGAAGGTGCAGTTTCTCTCAGTGAACTTAGGCTACAGAAGAACTTGCTAATTGGGAGAATTCCAGCACAAATTGAGAAGTGTTCATCCTTAACATCCTTGAATCTTTCTCACAACAAGCTTAATGGTTCAATCCCTGCACCAATTGCAAACCTAACCAATCTTCAGTATGTGGATTTGTCATGGAACCAACTCTCTGGAAGCTTACCAAAGGAGCTAACAAATCTTTCTCAGCTTTTCTCATTTAATGTGTCGCACAATCACCTTCAAGGAGAGTTACCAGTTGGTGGTTTCTTCAATACAATCTCTCCTTCATCTGTCGCCGGTAATCCGTCGTTATGTGGTTCTGTTGTCAATCACTCCTGTCCATCTTACCATCAAAAGCCAATTGTCCTGAATCCCAATTCTTCTTACTCCAACTCAGGACCTTCCTTACAAAATCGCCACCATAAGATCATCCTCAGTATATCTGCACTTATTGCTATTGGTGCAGCAGTTTTCATTGCTGTTGGTGTTGTGGCTGTTACTGTCCTTAATATCCATGTCAGGTCCTCGATGTCGCGTTCTGCTGTGCAATTTGCATTCTCTGGTGGCGAGGACTACTCTTGCTCGCCCGCGAAAGATCCTAACTATGGCAAGCTTGTGATGTTTTCTGGTGATGCTGAATTTTCTGATGGGGCTATTAATCTTCTTAACAAAGATAATGAAATCGGCCGTGGCGGATTTGGCGTTGTTTATTGCACTTTCCTTCGAGATGGCCGTTCTGTTGCTATCAAGAAGCTCACAGTCTCTGGCTTGATCAAGTCTGAGGAGGAATTCGAGAGCGAAATTAGGAAGCTCGGGAAGATCAGGCACCGGAATCTTGTTGAACTTGAAGGTTATTACATGACTTCATCATTGCAGCTACTTATTTATGAGTACTTATCAATAGGTAGTCTGCATAAGCTTCTACATGATAATGCTGATAGCAAAAATGTGCTTTCTTGGGAAACAAGGTTCAAGATTATTCTTGGCATGGCAAGAGGATTGGCCTATTTGCATCAAATGAACATAATCCATTACAATCTAAAATCAAGCAATGTTCTGATTGATTGTTCTGATGAGCCGAAGATAGGCGATTTCGGGTTGGTTAGCCTATTGCCAAAGCTAGACCATTATGTCTTGAGCAGCAAAATGCAGAGTGCACTAGGATACATGGCTCCTGAATTCGCCTGCCGGACGGTTAGGATAACCGAGAAGTGCGACGTATACGGCTTCGGAATCCTTGTCCTTGAGGTTGTGACAGGGAAAAGGCCAGTGGAATACATGGAGGATGATGTTATTGTTCTTTGTGACATGGTGAGGAGTGCATTGGAGGAAGGGAAATTGGAGCAATGTGTTGATGAGAGGCTTTTGGGGAATTTTGCAGCAGAGGAAGCAATTCCTGTTTTGAAATTGGGGTTAGTTTGTGCATCACAAGTTCCATCAAATAGACCTGATATGGCTGAAGTAATCAACATTCTAGAGTTGATTCAATCTCCTTCAGAAGAAATACAATGA 3171 0.4235 MALGGTAPPRGSAAAAASLRRRRTTSGGASGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVSVVVIVGGGGVWFICSAFLGPINLFFLYHIQAINEMTSSLLKDTVFNDDVLGLIVFKAGLQDPKGKLTTWNEDDYTPCNWVGVKCDPSTNRVNALVLDGFSLSGHIDRGLLRLQFLQILSLSRNNFTGFINPDLTSLGNLQVLDLSENNLSGQIPHGFFQQCWSLRSVSFANNNLTGKIPDSLTSCTSLETLNFSSNRLNGELPSGVWFLKGLQSFDLSSNLLEGEVPEGIQYLYDLRELRLGKNRFIGRIPEDIGGCLLLKLIDFSGNFLSGKLPESLQRLTSCTSLSLQGNSFTGGIPNWIGELKNLEMLDLSANRFSGWIPKSIGNLDSLSVLNFSRNEITGNFPDSMVNCIRLLVLDISHNHMEGSIPSWIFKMGLESVSLSGNRFSKSIPVSYHGLQVLDLSSNAFSGKVPNAIGGLSSLQVLNLSSNNISGTIPVSIGQLKSLYILDLSGNKLNGTIPSEIEGAVSLSELRLQKNLLIGRIPAQIEKCSSLTSLNLSHNKLNGSIPAPIANLTNLQYVDLSWNQLSGSLPKELTNLSQLFSFNVSHNHLQGELPVGGFFNTISPSSVAGNPSLCGSVVNHSCPSYHQKPIVLNPNSSYSNSGPSLQNRHHKIILSISALIAIGAAVFIAVGVVAVTVLNIHVRSSMSRSAVQFAFSGGEDYSCSPAKDPNYGKLVMFSGDAEFSDGAINLLNKDNEIGRGGFGVVYCTFLRDGRSVAIKKLTVSGLIKSEEEFESEIRKLGKIRHRNLVELEGYYMTSSLQLLIYEYLSIGSLHKLLHDNADSKNVLSWETRFKIILGMARGLAYLHQMNIIHYNLKSSNVLIDCSDEPKIGDFGLVSLLPKLDHYVLSSKMQSALGYMAPEFACRTVRITEKCDVYGFGILVLEVVTGKRPVEYMEDDVIVLCDMVRSALEEGKLEQCVDERLLGNFAAEEAIPVLKLGLVCASQVPSNRPDMAEVINILELIQSPSEEIQ* 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1972 1056 ProSiteProfiles Leucine-rich repeat profile. 574 597 IPR001611 GO:0005515
Aev02g1972 1056 SUPERFAMILY Protein kinase-like (PK-like) 775 1048 IPR011009 -
Aev02g1972 1056 SUPERFAMILY L domain-like 384 650 - -
Aev02g1972 1056 ProSitePatterns Protein kinases ATP-binding region signature. 781 804 IPR017441 GO:0005524
Aev02g1972 1056 SMART LRR_sd22_2 384 410 - -
Aev02g1972 1056 SMART LRR_sd22_2 288 311 - -
Aev02g1972 1056 SMART LRR_sd22_2 596 622 - -
Aev02g1972 1056 SMART LRR_sd22_2 524 547 - -
Aev02g1972 1056 Pfam Sec61beta family 34 73 IPR016482 -
Aev02g1972 1056 PRINTS Leucine-rich repeat signature 218 231 - -
Aev02g1972 1056 PRINTS Leucine-rich repeat signature 524 537 - -
Aev02g1972 1056 Gene3D Transferase(Phosphotransferase) domain 1 852 1053 - -
Aev02g1972 1056 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 122 1049 - -
Aev02g1972 1056 ProSiteProfiles Protein kinase domain profile. 775 1048 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev02g1972 1056 Gene3D Phosphorylase Kinase; domain 1 760 851 - -
Aev02g1972 1056 Pfam Leucine rich repeat 386 444 IPR001611 GO:0005515
Aev02g1972 1056 Pfam Leucine rich repeat 217 277 IPR001611 GO:0005515
Aev02g1972 1056 Pfam Leucine rich repeat 458 513 IPR001611 GO:0005515
Aev02g1972 1056 Pfam Leucine rich repeat 574 633 IPR001611 GO:0005515
Aev02g1972 1056 Gene3D Ribonuclease Inhibitor 283 380 IPR032675 -
Aev02g1972 1056 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 122 1049 - -
Aev02g1972 1056 Gene3D Ribonuclease Inhibitor 386 669 IPR032675 -
Aev02g1972 1056 Pfam Leucine rich repeat N-terminal domain 125 164 IPR013210 -
Aev02g1972 1056 SUPERFAMILY L domain-like 142 473 - -
Aev02g1972 1056 SMART LRR_typ_2 596 619 IPR003591 -
Aev02g1972 1056 SMART LRR_typ_2 384 408 IPR003591 -
Aev02g1972 1056 SMART LRR_typ_2 620 644 IPR003591 -
Aev02g1972 1056 SMART LRR_typ_2 264 288 IPR003591 -
Aev02g1972 1056 SMART LRR_typ_2 312 336 IPR003591 -
Aev02g1972 1056 SMART LRR_typ_2 215 239 IPR003591 -
Aev02g1972 1056 SMART LRR_typ_2 500 523 IPR003591 -
Aev02g1972 1056 SMART LRR_typ_2 524 548 IPR003591 -
Aev02g1972 1056 Gene3D Ribonuclease Inhibitor 125 282 IPR032675 -
Aev02g1972 1056 CDD STKc_IRAK 781 1048 - -
Aev02g1972 1056 Pfam Protein tyrosine and serine/threonine kinase 776 985 IPR001245 GO:0004672|GO:0006468
Aev02g1972 1056 ProSiteProfiles Leucine-rich repeat profile. 502 524 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1972 Aev-Chr2 21491804 21498490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1972 96 1056 Receptor kinase-like Gene Family AT5G01890 60.472 0.0 1121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Aev02g1972 PK_Tyr_Ser-Thr 2.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1972 - - gmx:100791204 1472.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g1972 02 21491804 21498490 Aev02g1972 02 21491804 21498490 ECH
Aev06g3085 06 32451088 32454102 Aev02g1972 02 21491804 21498490 PCT