Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1955 ATGGCGATTTCTCCGCAAACGTTCACGCCACGAAAACGACGACCCTCTGGTGGGTCGTTTAGTTCTCAGAAGCAAAACGACATCAACCTCCTTCACTCCCTTCTTCACCTAACGACACAGATATCTTCAATTAACCCTTCAACGACGCAGCTTCTAGTGAAACGCAGCGTTTCCTCCGTCGTTCGCAAGGCGAAGCTTCTCGCGGTTCTCTTCGAGGATCTGATACGAAATTCCAATTCTGCCCCTGCCTTTTGTTCTTGTTCGTCTTCTTCCTCGTTCCTCCTTTGCCTCGAGGAAACCTACATCGTGCTGCACAGGATCAAAGCTCTGATCGAAGATTGCTCCAATGGAAGCAAATTCTCACTCCTTATGCAGATCGAAACCGTCGCCGATAGTTTCCACAAGCTCACCGGAGAACTCTCTACGCTCCTTGACATTTTCCCGATCCACGATTTGAACCTAAACGACGACGTTCGGGAGCTCGTGATCCTCATCAGAAAACACTGCTCGCAATCGAAGCCTGTGGTGGAAGAAGCAGAGGAGAAGCTCCGAAACGACGTCGTTTCGATTCTCGAGAGCATCAAGAACGAGATCGTCCCTGACCACAACCACCTCGCAGCGATCTTCGAGAGGTTGGGAATTCGCGATTCTTCAACCTGCAGAGCGGAGATCGAGAGCTTGGAGCAGGAGATTCAGAATCGGAGCGAGGAGCAATCGAAATCGGAGATTGTTGCTTTGATTGGCCTCGTTCGTTACGCCAAGTGTGTGCTTTTCGGTGCTTCTACTGCGGCGTCATCGGAACAGGCTCAGCGGCGGAAACAGCCGTCATCGGAGGTGGTTGTTCCGGCGGATTTCCGGTGTCCGATAAGCCTAGAGCTCATGCGTGATCCTGTTGTCGTGGCGACAGGACAGACGTACGATCGGGAATCGATCAAGCTCTGGATTGATGCTGGACACAACACGTGTCCCAAGACGGGTCAGGCACTTTCACACACGGATCTCATACCCAATCGCGCACTGCGGAACATGATAGCTTCGTGGTGCCGCGAGCAGAGGATCCCGTTCGAATCGGAAACCGTCACCGGAAAAATCAACGGCCGCGTAACTAACAAGGCCGCGCTTGAAGCCACGCGCATGACGGCGTCGTTTCTCGTCAACAAACTCAAGGTTCCCATCACCAACTCTCAGACAATGGAGGAGTCAAACGGCGTCGTTTACGAGCTTCGGGTTCTAGCAAAAACAGATTCGGATAGCCGAGCCTGCATCGCCGAAGCTGGAGCCATACCTCTTCTGGTTCGGTACCTCAGCTTCGATGTCGGTGTTCACAGCCCGAGCCTACAGGTTAACGCCGTTACGACGATACTAAACCTGTCGATATTGGAAGCAAACAAAACGAGGATAATGGACACTGACGGCGCGTTAAACGGCGTCGCTGAGGTTCTGCGTTCGGGTGCCACGTGGGAAGCTAAGGCAAATGCGGCTGCCACGGTGTTTAGTTTGTCTGGTGTGGCAGCGTATAGGAAGAGGCTTGGGAGGAAGACACGTGTTGTTAGTGGATTGGTCCAGCTGGCAAGGTGTGGGCCCGAGGGTGCTAGGAGGGATGCTTTGGCGGCAATTTTGAGCTTGGCGGCGGATAGGGAGAGTGTAGGGAAGTTGGTGGAGGCCGGCGCGGTGGAGATGGCGGTGGAGGTGATGGCGGTGGTTCCTGAGGAGGCGGCGACGGTGCTCGAAGCGGTGGTGAAGCGCGGTGGTCTTGTGGCGGTGGCAGAGGCGTATGCCGGGATCAAGAGGCTTGGGACGGTATTGAGGGAAGGATCGGAGAGGGCGAGGGAGAGCGCGGCGGCGACACTAGTGACGATGTGCCGGAAGGGCGGGTCGGAGGTGGTGGCGGAGCTGGCGGCAATTCCGGGTGTGGAGAGGGTGATTTGGGAGCTCATGGCGGTGGGGAGTGTCCGAGGGAGGAGGAAGGCGGCGACATTGTTGAGGATCCTACGGCGGTGGGCGGCGGGGCTAGACGGTGCCGAGAGTGAAGGGTTCTCCACAACTAGTGTGGTTGTTCCAACTTCCAATCCAATAGCACAGTGA 2085 0.5559 MAISPQTFTPRKRRPSGGSFSSQKQNDINLLHSLLHLTTQISSINPSTTQLLVKRSVSSVVRKAKLLAVLFEDLIRNSNSAPAFCSCSSSSSFLLCLEETYIVLHRIKALIEDCSNGSKFSLLMQIETVADSFHKLTGELSTLLDIFPIHDLNLNDDVRELVILIRKHCSQSKPVVEEAEEKLRNDVVSILESIKNEIVPDHNHLAAIFERLGIRDSSTCRAEIESLEQEIQNRSEEQSKSEIVALIGLVRYAKCVLFGASTAASSEQAQRRKQPSSEVVVPADFRCPISLELMRDPVVVATGQTYDRESIKLWIDAGHNTCPKTGQALSHTDLIPNRALRNMIASWCREQRIPFESETVTGKINGRVTNKAALEATRMTASFLVNKLKVPITNSQTMEESNGVVYELRVLAKTDSDSRACIAEAGAIPLLVRYLSFDVGVHSPSLQVNAVTTILNLSILEANKTRIMDTDGALNGVAEVLRSGATWEAKANAAATVFSLSGVAAYRKRLGRKTRVVSGLVQLARCGPEGARRDALAAILSLAADRESVGKLVEAGAVEMAVEVMAVVPEEAATVLEAVVKRGGLVAVAEAYAGIKRLGTVLREGSERARESAAATLVTMCRKGGSEVVAELAAIPGVERVIWELMAVGSVRGRRKAATLLRILRRWAAGLDGAESEGFSTTSVVVPTSNPIAQ* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1955 694 Gene3D - 382 591 IPR011989 -
Aev02g1955 694 SUPERFAMILY RING/U-box 277 354 - -
Aev02g1955 694 Pfam U-box domain 281 352 IPR003613 GO:0004842|GO:0016567
Aev02g1955 694 SMART Ubox_2 284 347 IPR003613 GO:0004842|GO:0016567
Aev02g1955 694 MobiDBLite consensus disorder prediction 1 23 - -
Aev02g1955 694 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 426 472 IPR000225 GO:0005515
Aev02g1955 694 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 16 14 682 - -
Aev02g1955 694 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 261 359 IPR013083 -
Aev02g1955 694 ProSiteProfiles U-box domain profile. 280 354 IPR003613 GO:0004842|GO:0016567
Aev02g1955 694 Coils Coil 217 237 - -
Aev02g1955 694 SUPERFAMILY ARM repeat 397 664 IPR016024 -
Aev02g1955 694 CDD RING-Ubox_PUB 285 327 IPR045210 -
Aev02g1955 694 SMART arm_5 415 459 IPR000225 GO:0005515
Aev02g1955 694 Pfam Armadillo/beta-catenin-like repeat 416 458 IPR000225 GO:0005515
Aev02g1955 694 PANTHER U BOX DOMAIN-CONTAINING 14 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1955 Aev-Chr2 21338560 21340644 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1955 1 692 U-box Gene Family AT5G01830 56.322 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1955 - - cam:101506886 933.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g1955 02 21338560 21340644 Aev02g1955 02 21338560 21340644 ECH